Gene Plim_1414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1414 
Symbol 
ID9138109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1806311 
End bp1807576 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content54% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003629447 
Protein GI296121669 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCTTG CCACATGCTG GACATTACTG CTTTCTGGAA TTCGAACTCC TCACCACCAT 
GAGTCGTCTT GGCGTCTTTG CTGCGGTATG GTTGGCTTAC TGCTGTTGGC AGATCGATGT
CTTGATGTTG CGGGTCAGCG GCTCGCAATT GCTCAGGACG GAGCGAATCA AGTCAGCTCC
AGCAAGCCGA TCCCCGGTTG GGAAGTGACT CCAGAGAGCG AAGCAGCACT TCAGAAAGGG
TTGGCCTGGC TCGCTCGAAA TCAGGGGACC GAAGGAAACT GGGAGTCGGA AGATCTTGGT
CTCGTGGGTC TCGGCGGTCT CTCGTTTCTA GCGGCAGGTC ACCTGCCACA GCGGGGGCGG
TATGGGGATA CCGTTGATCG CGCATTCAAA TATGTGCTCA AAAAAGCCAA ACCTTCGGGG
CTTCTCAATT CCGCCGATGC CCAACGCGAT ATGTACAACC ACGGGCTCGC TGCTTTTGTG
CTTGGGCAGG CCTACGGCAT GACTGGCGAC CCGCAAATTG GCCGCGTGCT CGATAAGTCT
TTAAGGCTGA TATCGAATAC CCAGTGCGAA GACGGGGGAT GGGATTATCG CGCCAAAAGG
CAGCAGCATG GCCATGATCT GAGTCTTGTC GTGATGCAGG CCAAGGCACT TCGAAGTGCT
GTCGATAGTG GTTTCGAAGT GCGGAACGAT GTCGTTCGCC TTGCGATACA GAGTGTGCGA
GATCATTACA AAGCCGAAAA TGGTGCTCGT GGCTTTGATG AAAAAGCTCA GGAAGGGCCT
GGTCAGTTCA CTTACGATGG GAATCGCACC ACGCTCGCGA TGGCTGCTTG TGGAGTTGTT
TGTCTACAGG AGTTTGGCCA ATACGACGAC TGGCGGATTG CCAAGAACAT GGAACAGATT
TCGAAAGAAG TCAGCCGCAT TCGCCCCAAT CGTGGTAGTG GTGAAGTCCC TTTTGATGCT
TACACGCTCT ACTACGTCGG ACAGGCGATT TATCAGACAG GTGGAGCCGA CTGGCAGAAG
AATTATCCTG CACTTCGAGA TTATCTCGTC GCTTCCCAGG TCAAGCGTCC GGAGAATCCC
GGTGAAGATG GCAGTTGGCG CGATACCCGC TGGGTGCATG GCAAGCAGGG GCAACTCTAT
GGGACAGCCG TCGCCTGCTT TATTCTGGCA ATGCCCAATC GATATCTCCC GATTCTCCAG
GAAGGGAAGA TCGAAGGTTT GAAAGATCAG TTATCCGGGC CACCTGCGGC GAACAAACCT
CGTTAG
 
Protein sequence
MNLATCWTLL LSGIRTPHHH ESSWRLCCGM VGLLLLADRC LDVAGQRLAI AQDGANQVSS 
SKPIPGWEVT PESEAALQKG LAWLARNQGT EGNWESEDLG LVGLGGLSFL AAGHLPQRGR
YGDTVDRAFK YVLKKAKPSG LLNSADAQRD MYNHGLAAFV LGQAYGMTGD PQIGRVLDKS
LRLISNTQCE DGGWDYRAKR QQHGHDLSLV VMQAKALRSA VDSGFEVRND VVRLAIQSVR
DHYKAENGAR GFDEKAQEGP GQFTYDGNRT TLAMAACGVV CLQEFGQYDD WRIAKNMEQI
SKEVSRIRPN RGSGEVPFDA YTLYYVGQAI YQTGGADWQK NYPALRDYLV ASQVKRPENP
GEDGSWRDTR WVHGKQGQLY GTAVACFILA MPNRYLPILQ EGKIEGLKDQ LSGPPAANKP
R