Gene Plim_1361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1361 
Symbol 
ID9138056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1733929 
End bp1734903 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content57% 
IMG OID 
Productprotein of unknown function DUF1559 
Protein accessionYP_003629394 
Protein GI296121616 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.462339 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGTAA CCCCTCGCAG AATTGGCTTT ACGCTCATTG AGCTGCTGGT CGTCATTGCG 
ATTATCGCCG TGCTCATTGC GTTACTGCTT CCCGCAGTAC AACAGGCACG CGAGGCGGCT
CGGCGTACCC AAAGCCGCAA TAATCTCAAA CAGATCGGGA TTGCACTTCA TAACTACCAC
GACGCCCACA AGGTGTTTCC CGCGGCTTAT CTCGGCAATA CGAGGCATCC ATCGCGGGAT
CCCAATACAT TCGATGGCCC CAACGGGTTT GCCTGGGGCA CCATGCTGCT CCCCTATCTC
GACCAGGCTC CACTCTACAA TTCCATTCGA ACGGACCTCC CCTGCTGGGC ACCGCAGAAT
GCCTCAGCCG TTGCCATCAA TCTCCCGGTC TTCATGTCTC CCTCTGCCTC CAATTCCAAC
GGACCGATGA TTGTTCGCGA TGGATCTGGC AATGAACTGG CCAGATTCGG TCGCGCCCAT
TATGTGGCGA ATGCCGGCCA GGATGAGCCC TGGGGGTATC AGATCGAGGA TTACTCACAG
ATCGCCAATG GCCCGATGTA CCGCAACTCG AAAATCCGCA CTGCTGATGT CACCGATGGT
CTGTCCAACA CGATCTTCAT TGGAGAGCAC AGCATTGTCA GTGACAAAAC GTGGGTGGGC
GTGGTCCCTG GAGCCGAGGT CTGCTCCATC GATCCAGCCA GATTCCCTAT GACCACATGC
GATGCTGCAG CGACGCTGGT CAATGTTCAC TCGGGCCCCG CTCAAGATGA GATCGATCCA
GTAACAGGGT TCGCTCCCAT ACATCCACCC AACAGCCCGC TGTGCCATGT CTGCCAGATG
TACTCTCCTC ACGCAGGCGG GGCTCATGTG TTGCTGGGCG ACGGCAGTGT CCGCTTCGTT
TCCCAATTCA TTCATCAGCC CACCTGGGCA GCACTCTCAA GCTGCCGAGG GAATGAAGTC
GTTGCCGAAT ACTGA
 
Protein sequence
MSVTPRRIGF TLIELLVVIA IIAVLIALLL PAVQQAREAA RRTQSRNNLK QIGIALHNYH 
DAHKVFPAAY LGNTRHPSRD PNTFDGPNGF AWGTMLLPYL DQAPLYNSIR TDLPCWAPQN
ASAVAINLPV FMSPSASNSN GPMIVRDGSG NELARFGRAH YVANAGQDEP WGYQIEDYSQ
IANGPMYRNS KIRTADVTDG LSNTIFIGEH SIVSDKTWVG VVPGAEVCSI DPARFPMTTC
DAAATLVNVH SGPAQDEIDP VTGFAPIHPP NSPLCHVCQM YSPHAGGAHV LLGDGSVRFV
SQFIHQPTWA ALSSCRGNEV VAEY