Gene Plim_1311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1311 
Symbol 
ID9138005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1676450 
End bp1677235 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content52% 
IMG OID 
Productglycosyl transferase family 2 
Protein accessionYP_003629344 
Protein GI296121566 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGAAGC CAGCAATTTT CGAGAAACAC CGCGTGTTGA CCGCACTCCC GGTCTACAAC 
GAAGCCAGGC ACGTTCACGA GGTGCTCTCT GTCGTTCGAA AGTACAGCGA TGACATTCTC
GTGGTGAACG ATGGCTCAAC GGATGGAACT GCCGAGGTTC TTGCCGAGTT TGCCGGGATT
AACGTCGTTC ACCACTCGAA GAATCAGGGC TATGGAGCCG GTTTGCGAAC GGCTTTCGAT
TATGCCTTGG CTCACCATTA TGATGCCCTG GTAACCATTG ATTGTGACGG GCAGCATGAA
CCTCGTTTGA TTCCAGAACT GGTTGCTGCG CTTTATCCCG CGAGTGGAGA CGCCGTCGAA
ATTGTTTCCG GGAGTCGGTA TCTGCAGAGA TTCCCAGGTG ATAGCCTTCC TCCCGTTGAT
CGCCGGCGGA TCAACATGGA GATCACTGCG TACCTGAATG AAATTCTCCA TTGGAATCTG
ACAGACACAT TCTGCGGCTT TAAAGCTTAC CGAGTTCCTT CGCTGAAGAA GTTTCAAATC
ACGGATCTCG GGTATGCCAT GCCCCTGCAG CTCTGGGTTC AGGCTGCCGC TGCTGGAATG
AAGATTGTGG AGTTTCCAGT ACCTTTAGTG TACCTCGAAG AAGAGCGTTC GTTTGGTGGA
TCTTTGGATG ACTCCGTCCG CAGGAAAGCT CATTATGAGG CAGTGATTCG TCAGGCGCTG
ATCGAGACGG GACTGTTTGA AACGGGTGTC AGTGATCATC AGCAGATCGT TTTGAATCAG
ATCTGA
 
Protein sequence
MVKPAIFEKH RVLTALPVYN EARHVHEVLS VVRKYSDDIL VVNDGSTDGT AEVLAEFAGI 
NVVHHSKNQG YGAGLRTAFD YALAHHYDAL VTIDCDGQHE PRLIPELVAA LYPASGDAVE
IVSGSRYLQR FPGDSLPPVD RRRINMEITA YLNEILHWNL TDTFCGFKAY RVPSLKKFQI
TDLGYAMPLQ LWVQAAAAGM KIVEFPVPLV YLEEERSFGG SLDDSVRRKA HYEAVIRQAL
IETGLFETGV SDHQQIVLNQ I