Gene Plim_1292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1292 
Symbol 
ID9137986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1650545 
End bp1651420 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003629325 
Protein GI296121547 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.187698 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGAAA TCATTCCACT TCATCGCGAC CATTCGAGGT TGTTTCATCA GAATCGCTAC 
GTCTATCCGG TTGTTTCCAG ACGAAGCGGT GGCATTTCCG TCGGGATTAA TCTCAATCCG
GATAAGGTCT GCAACTTCGA TTGCATCTAT TGTCAGGTCG ATCGGCGAAG TGAAGCCGAG
ACGAATTTTG TCGGTACTGA ACAACTTCTG GCCGAACTCG ATGAAGTGAT TGAACTGGTG
ACTAGCGGCA GGCTCTGGGA CGATGAAAAA TTCGGAGCCA CCCCTCAGGC GTTTCGTCGC
TTCAATGACA TAGCCTTTTC CGGTGATGGA GAACCCACCA CGTTTCGAAA CTTCGACTTG
ATTGTGAATG AAGTTGCTCA AAGGAAGATG AATGCCGGGG TCGACCAGGT AAAGATGGTC
TTGATCACCA ATGCCAGTAT GTTCCATCGA CCAGCCTGCC AGCGCGGGCT GGTGGTGCTG
ATGGCTCATC AGGGAGAGAT CTGGGCCAAG CTCGATGCCG GGACTGAAGA GTATTACCAC
CTGATTGAAC GAACTCGCAT TCCCTTGGCG AGAATTCTGG AGAACATTCT CGATGTCTCG
CTGCGCTGGC CTGTCGTGAT CCAGGCCCTC TTTATGAATG TGGCTGGTGT GCCTCCGACA
GACGCCGAAA TCTCCGCCTG GCTGGGCCGC TTAAAAGACA TTCTTTCCGC AGGTGGCCAG
ATTTCTCTGG TCCAGGTTTA CACAGTCGCA CGACCACCTG CCGAAGCGAT TGTCACACCG
CTCTCAGATG CCGAGGTTGA TCACATTGTG AAGCGTTTGC AGCAGGAAAC ATCGCTGACC
GCTCAAGGAT ATTACGGTTC CCGCACGTCA TCCTGA
 
Protein sequence
MAEIIPLHRD HSRLFHQNRY VYPVVSRRSG GISVGINLNP DKVCNFDCIY CQVDRRSEAE 
TNFVGTEQLL AELDEVIELV TSGRLWDDEK FGATPQAFRR FNDIAFSGDG EPTTFRNFDL
IVNEVAQRKM NAGVDQVKMV LITNASMFHR PACQRGLVVL MAHQGEIWAK LDAGTEEYYH
LIERTRIPLA RILENILDVS LRWPVVIQAL FMNVAGVPPT DAEISAWLGR LKDILSAGGQ
ISLVQVYTVA RPPAEAIVTP LSDAEVDHIV KRLQQETSLT AQGYYGSRTS S