| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1274 |
|---|
| Symbol | |
|---|
| ID | 9137968 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 1630269 |
|---|
| End bp | 1631348 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003629307 |
|---|
| Protein GI | 296121529 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCTATT TGCTGGCGAT CTCATTGGTC TTTGGGGGAA GAGTCGCTTC AGCGCAAGTG
CCTGAAAGAT CACCAGCGGA TGTTCAAATT GAAAAACCTC TCCCACGTCG GGATACCATC
GAGATCGATG CCCGTAAGCT GCTGACACCC GCGACAGACG CCAGCATTAA TAAAGGGCTG
GCTTTTCTTG CTGCCCGCCA GCATACCGAT GGTTCGTTTG GTTCCGGGTC AATTTATCGG
AGAAATGTGG CAGTCACCGG GTTGGCAGGG ATGTCGATGC TGGCTGCCGG CAGTACTCCC
AGCCGCGGCA AGTATGCGAC GGAAATCAAG CTGTCGATCG ACTTCATTCT CAAGCACTCC
AAGCCCTCAG GTTACATTCT TTGCGAGGAG AGTCCTTCGC ATGGGCCCAT GTACGGGCAT
GGCTTTGCAA CACTTTATCT GGCGGAAGTC TATGGCATGA CTCCTCAGGA AAATGTGCGC
ACAGCCCTGA AAAATGCCGT GAATCTGATT GTAGGCTCGC AAAATCCCGA AGGAGGATGG
CGTTATGACC CGGATGGAAA AGATGCCGAT ATCTCGGTGA CTGTCTGTCA GATGATGGCC
TTGAGGGCGG CCCGAAATGC AGGGATTGCC GTCCCTCGGG AAACAGTCGA TCGCTGTACC
GAATATGTGA AGAAGTGCCA GAATGGTGAT GGCGGATTCC GGTATCGACT GGAGCCCCGA
CCACAAAGCC AGTTTCCGAG ATCTGCTGCA GCATTGGTGG CGTTGAACAG TGCCGGTATC
TATGAAGGGC CGGAAATTCG CACCGGGATT GAGTACCTGC TGAGGTTTTC ACCCAGAGCA
GAACTCTTTC GCTATGAGAA TCATTTCTAT TACGGCCATT ACTACGCAGT GCAGGTCATG
TGGCATCGCG GTGGTGAGGG TTGGGAAAAC TGGTACTCTG GCATTCGAGA TGAACTCCTC
GAGCGGCAAC TCCCCGATGG AAGCTGGCCC GATTCGCTGA TTTGTGCCGA GTATGGCACT
GCCATGGCCT GTCTGATTCT GCAAATGCCC AATAACTATT TGCCAATCTT TCAGCGATAA
|
|---|
| Protein sequence | MIYLLAISLV FGGRVASAQV PERSPADVQI EKPLPRRDTI EIDARKLLTP ATDASINKGL
AFLAARQHTD GSFGSGSIYR RNVAVTGLAG MSMLAAGSTP SRGKYATEIK LSIDFILKHS
KPSGYILCEE SPSHGPMYGH GFATLYLAEV YGMTPQENVR TALKNAVNLI VGSQNPEGGW
RYDPDGKDAD ISVTVCQMMA LRAARNAGIA VPRETVDRCT EYVKKCQNGD GGFRYRLEPR
PQSQFPRSAA ALVALNSAGI YEGPEIRTGI EYLLRFSPRA ELFRYENHFY YGHYYAVQVM
WHRGGEGWEN WYSGIRDELL ERQLPDGSWP DSLICAEYGT AMACLILQMP NNYLPIFQR
|
|---|
| |