Gene Plim_1247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1247 
Symbol 
ID9137941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1599773 
End bp1600363 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content55% 
IMG OID 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_003629280 
Protein GI296121502 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.169218 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGCAT TCAACCGCGC CGTTGCCTTA TGCCTCACCC TTTGCACCTT AGGCCTTGGG 
GGAATCTCAG CTTCCGCTGC CGACCTCAAG GTGGGAGACA AAGCCCCCCA GTTTGAAGCA
CTGGATACGC AGGGCCAAGC CTGGAAGTCG GCCGAACATG TGGGCAAGAA GCTGATTGTC
GTTTACTTCT ATCCTGCCGA TATGACGGGT GGCTGCACCA AGCAGGCCTG TGCCTTCCGC
GACGATCTGT CCAAGCTGGC GGGCCAGGAT GTTGAGGTCG TCGGTGTCAG TGGTGATTCT
GTCCGCAATC ACCAGTTGTT CTCCAAGAAG CATAATCTGT CATTCACGCT GCTCGCTGAT
ACCGAGGCCA AAGTCGCTGA GGCGTTTGGC GTTCCCTATA CCAAAGGGGA AAAGTCGGTG
AAGGCCGAAG TCGATGGCAA AGAAGAAACG TTGCTTCGCA ATGTGACCAT CCAGCGCTGG
ACTTTCATCA TCGACAAGGA TGGCAAGGTC GCCTACAAGA ACACGAAAGT CGCCGCCGCC
GATGACAGCA AAGCTGTTGC AGAAGCCGTC GCGTCGATCA AGAAGAAGTA A
 
Protein sequence
MIAFNRAVAL CLTLCTLGLG GISASAADLK VGDKAPQFEA LDTQGQAWKS AEHVGKKLIV 
VYFYPADMTG GCTKQACAFR DDLSKLAGQD VEVVGVSGDS VRNHQLFSKK HNLSFTLLAD
TEAKVAEAFG VPYTKGEKSV KAEVDGKEET LLRNVTIQRW TFIIDKDGKV AYKNTKVAAA
DDSKAVAEAV ASIKKK