Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1226 |
Symbol | |
ID | 9137920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 1568420 |
End bp | 1570459 |
Gene Length | 2040 bp |
Protein Length | 679 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
Protein accession | YP_003629259 |
Protein GI | 296121481 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.18591 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGAAC AATGGCTGTG GAGTTCACGG GTGCGCCCCG TTGTTGATGG CTCAGGTTCT CACTCACAGA ACGTGGTGGA TCGCGCGACT TACTCCGGGC GGTCAACAGG TTCACTTTTC AGTAACTCCA GTATTCAACT CCGAACGAGC CTGGCGCTGG CGTTGATGAT TACCCTGATG TGCCCGGGCC GCGAAGCTCA AGCACAGGTG ACTGCCAAGC AGATTCTCCA GGCTTACTCG CCTCGACAAA AGGATGTCGA TTATGAGGTG CCAACGCCCG CTGATCTGGA AAAATGCCAG GTGACTGTCG AACGGCTGGG CAAAGTCTCT GGATACGTGG TGCTGGGTGC TCAGGGCCAG TTACTTCGTC GCTTCATGGA TACCAACGGT GATAACAAAG TTGACCAGTG GCGCTACTAC AATCACGGAA TTGAGGTCTA CCGCGACGTC GATTCCAACT TCAACGAGAA ACCCGATCAG TTTCGTTATG TGAATCTGGG CGGAAGTCGC TGGGGAATCG ATCAGAATGA AGATGGTAAA GTCGATTCAT GGAAATCCAT TTCTGCCGCA GAAGTCTCTC GAGAAGCCAT CAAGTCGATG ACAACTGGGG ATTTTGGCCT GTTGGAGACG TTGCTGATCA ATGCGGCTGA TTTGCGAACT CTGGGAGTTA ACGCCGCACT GCAAAAGAAA ATGCTCGAGA ATGTCAGCCA GCCGGAAGCC AAAGTGCGGC AGATTTTCTC CAAGTCCAGA GATTTCACAC CGAAGTCTGT CTGGGTGCGA TTTGATGCAT TAATGCCCGG ATCCATTCCT GCGGACGACG GAAAAGCCGA GACCGATCTT CAGGTTTACG AAAATGCGAT GTGCATTGTT GATAACGGTG GGGGCAAGAC CGCGCTGATT CAGTTAGGGG AACTGGTACG CGTGGGCGAT GCCTGGAAAT TGACTCAGAT CCCTGAACCG ATTGGAAGCG ATTCGATTAC CGTCGCAGGT GGTGTGTTGA TGCAGCCACT CTTGGCCAGC GCTGAAAGTG CGGCTCCCTC GGTCTCCCCG GAAATGCAGG CTTTGCTGGA TAAGCTACAG AAACTGGATG CTTCCTCGGC TTCCCTGGCT GGCACACCGG AAGCCATGGC GAAGTTCAAC AATGCTCGCA TTGAACTGCT CCTGCAGATC GTGAATGCCA CCACTTCTGA AGATGACAAA GAGCAGTGGA TGCAGCAATT GGCCGATGGT TATGCCGCTG CTATTCAGAC GGGCCAGGGT GGAGACAGTC TGGATCGATT AAAGGATATG GAAACGAAGC TCAAAAAAGA TGCAGCAGCT TCCCCACTGG TGCCTTATGT CACTTACCGT CGCATGTTGG CCCAGTACAG CGTCGAAATG AATACCGCGA ATGAGGCCAA GCGGGCGGAT ATTCAGAAAG CATGGCTGGA AAGCCTCGAA GGATTCATTA CGACCTATCC GAACTCAGAA GATGCCAGCG AAGCGATGCT GCAACTGGCG ATTACCGAAG AGTTCAATGG CCGTATCAAA GAAGCCGTCG CCTGGTACAG CAAGCTGGCA GCGGCACAGC CTCAATCCAT CGCGGGGAAA AGGGCCGCTG GTGCAGTAAC TCGAATTCAA CTCAATGGGC AGCCACTGAA GCTTTCGGGA ACTTTGCTTG AGGGTGGGAG TTTCAATGTA TCGCAACTGA AAGGGAAGGC AGTTCTGGTG GTCTACTGGG CCACATGGTG CCAGCCTTGT GCAGCCGATC TCCCTCAGAT TCGAGCCCTT TACGAACAGT ATCGCGCACA GGGATTTGAA ATTGTAGGCG TCTGCCTTGA TGTGGATACG TCACCTCAGG ACGTGAACAA ATTCCGCGTG GAAAACAAGA TGCGCTGGCC GCAGATCTAC GAGCGAGGTG GTCTGGAAAG TCCGGCGGCT GTCCAACTGG GTGTCATCAC ATTGCCTACG ATGATTCTGA CAGATCGAGC TGGTCGTGTG GTGAACCGTG GAGCCACAGT TCAGGATTTG AAGACGACTT TACCCCAGAT CCTGAAGTAA
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Protein sequence | MSEQWLWSSR VRPVVDGSGS HSQNVVDRAT YSGRSTGSLF SNSSIQLRTS LALALMITLM CPGREAQAQV TAKQILQAYS PRQKDVDYEV PTPADLEKCQ VTVERLGKVS GYVVLGAQGQ LLRRFMDTNG DNKVDQWRYY NHGIEVYRDV DSNFNEKPDQ FRYVNLGGSR WGIDQNEDGK VDSWKSISAA EVSREAIKSM TTGDFGLLET LLINAADLRT LGVNAALQKK MLENVSQPEA KVRQIFSKSR DFTPKSVWVR FDALMPGSIP ADDGKAETDL QVYENAMCIV DNGGGKTALI QLGELVRVGD AWKLTQIPEP IGSDSITVAG GVLMQPLLAS AESAAPSVSP EMQALLDKLQ KLDASSASLA GTPEAMAKFN NARIELLLQI VNATTSEDDK EQWMQQLADG YAAAIQTGQG GDSLDRLKDM ETKLKKDAAA SPLVPYVTYR RMLAQYSVEM NTANEAKRAD IQKAWLESLE GFITTYPNSE DASEAMLQLA ITEEFNGRIK EAVAWYSKLA AAQPQSIAGK RAAGAVTRIQ LNGQPLKLSG TLLEGGSFNV SQLKGKAVLV VYWATWCQPC AADLPQIRAL YEQYRAQGFE IVGVCLDVDT SPQDVNKFRV ENKMRWPQIY ERGGLESPAA VQLGVITLPT MILTDRAGRV VNRGATVQDL KTTLPQILK
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