Gene Plim_1040 details

Gene Information

• Locus tag: Plim_1040
• ID: 9137726
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 1312724
• End bp: 1316092
• Gene Length: 3369 bp
• Protein Length: 1122 aa
• Translation table: 11
• GC content: 54%
• Product: glycosyl transferase family 2
• Protein accession: YP_003629081
• Protein GI: 296121303

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGTACG CCCGCGCGTT CGTCATCGTT TCCGACGATC GATACTTCCC CGGACTTCAA 
GCCGCACTGG GAAGTATCCA CGCCTACTAC GGACAAGAGA TCCGTGTCTT CGTCGTCGGT 
CATGGACTGA CGGCACCGCA GGTGGAGTCA CTGAAGAACC ACCCGCTGGG ATCCGCCATT 
ACCTTGCTCC GCACCCAGGA CTTCGCCTCC CGGCCCAGCG GATGTTGGGA AGCCAAGCAG 
CTCTGCCTCA GCGAGCTGGT TGCGTCCGTG CGCACCGTCT GTCTGATGGA CGCCGATCTG 
ATCCTTCTCT CGCGGGTGGA CGACATCTTC GAACTGGCGG AGCAGGGAAA AATCATCTCC 
TCGCGCGACG GAGAGGGGAT GCAGTTCGGG CCCGAATACC AGGTTTACTC ACCCGCTCTG 
GTGGGGCCGC GGCAGGACTA CATCAACTCG GGATTTCTCA TATTCGATCT TCGCCAGCAC 
TGGGATCTCG TCGCCCTGTG GTCGTTCACG GCTCGCTTCG CCGGTTACTC CCCCGGCAAG 
GGTTGGCCCT TCGCATTTCC GGGACATGGG GATCAGGGGG TCTTCAACGC ACTGCTGGCC 
CTCCAACAAA AGTCTGATTT TCTGCATGCT CTTCCGGAAA ACACTTGGTG CAACTCTGCT 
GGATGGAAAG AGGGGCGAAA GGTCCGCGTT ACACATCAGG AGGGGAACCG CTTGAGTGTG 
ATTCATGAAC CTGGCGGAGA ACAGCAGCGA GTTCTGCACA GTTCTGGCCC TAAGTGGTGG 
ACAGACGAAG GTCGCACTTT CTTCGCATCT GCTGGTGATG TCCTGCGATG TTTTGATGCT 
ATGCGAAAGA TCACCGAGCC AACGATGGGC TCAAACAAAA ACCTTGGAAT CAGTTCTCCC 
GAGGAGAGGT CAAAACCTGC GTTGAGTGTT TGTGTGGCGA TCAAAAATCG CTCGAAAGTA 
AGTGTCGGGC TAGAAAGTCG GGAATTATTT CCCAACTGTA TCCGCAGTCT GCTCAGTGCG 
TCGGCTGGCG GCTTGAAAAT TGAACTCGTC GTGGTGGATT TTCAGTCGGA CGATTGGCCA 
CTCGAAGAGT GGTTCTCAAA TTTGGTGGGT GACGTTGCTC ATCAGTTAAT CACTTTGCGG 
GAACCTTTTT CACGGGGGCG GGGACTCAAT GTTGCAGCAT CTGCTGCACG ATCTGATCGA 
TTGCTGTTTC TCGATGCCGA CATGCTTGTT GACAATTCTG TGCTTGAAAG AGCCTACGAG 
GTCGTCAATT CTGGTCGAGT CTGGCTTCCC ATCTGCGAAT GTGTGAAGTC CGATGGAACC 
TTCGACAGTT GGGGTTTTTT GGGGAACGTG GCCTGTGATC GGGAAGTTTG GAATGCAGCA 
GGTCAGATTC CCGAGTTTTA CAGTTGGGGC GGTGAAGACA ATCTGTTTGC AGATCGCTTG 
CAATCCATCA AGCCGGGCAT TCGCGAAGTC AGTCTCGGTT TCCGACATCA ATGGCATCCC 
GAGTCGTTGC GACATGCTTA CTACATTCGC CCTGCTCAGA GCGACTTCTT TCGAATAGAT 
CAACAGGCTA CAAGCCCAGT CCAGCAATTG TGGCGACTCT CAGCACATCA CCCGGAATGG 
CAGGGAGAGA TACAGTTCTT CACAACTGGA CGAATGGGGC GTCCGGGAGG AATGTTTGGT 
AGTTTCCAGG CCTCTGCCGA ACAACTGACC TTGCACTGGG ATTCGGGACA TTCTGATACA 
TTTCGGTGGG ATTCCACTGT CCAAAGATAT GTGCATGATC TGCTGGATTT TTGGTTGGAA 
CCTTTCACTT CTCTGGAATC CATGGATATA GAACGTCTTT TGAACCGCCA AGTTGAAGCA 
TTATCCCTAG AAGAAACTCC TAAGTCGTTT AAGCACCTCA CAATACCACT TCCGGATCTA 
CTCTCGCGCC GCGATCTTTT GCCTCGAATT CTGGTCTTTA GTTCTGTTGG TGATCGGGGA 
ATTGCTGTTA ACTCGTGGCT GGGGATCTCT TCTGCACGAC AGGATCGACC GTTTGATACA 
GCCATCGTCT ATTATGGCAA CTATCCGACC GGTGACTGGG CACAGGGACT CCGCGCACGC 
TCCTGCTATT TTGGGCGTCA TCGTGGGGGT AAAATTCAAA ATCTCTCTTG GCTAATAAAG 
CAGCATCCCA CTTTGCTTGA AGATTATGAC TACGTATTCG TTCTTGACGA CGACTTACGC 
ATTACGCCGG ATATGATTGG GCGCGTGGTG CGAACGGCCC GGGAATTCGA TCTCCCCATC 
TGTTCACCTA GCCACGACTG GAGAGGAAGG ATTTCCTGGC TCCACATGGG AGCCCGCGGA 
AGTGGTCGCC GGGCTGCTGA ACCTCCTGCT GGAGTGGAGT TAACCAATTT CGTCGAAGTG 
ACTTGCCCGC TCTTTGAGAC AGATGCTCTT CGCGAATATC TGAATCACTT CCTCTGGTGC 
GGTTCTGAAT TAACCGGTTG GGGTGATGAT TGGTTGATGA CGGCGGCCTG TTTCCAAGAG 
AGTCGTCCCT TTGGCGTGCT TCACAACATC ACAATTTGTA ATCCCAAAGA TCGGCCAGGA 
CCCAACCCCC AGCTTCGTGA AATTGATCAA CTGCATGCGG TGGAAGAGAG GCTGACAGCC 
TGGAAGCGAG TCAAGCAACG ATTGGGTGGC CGCCTTCCCG TCACAGAAGA AGTTCGCACG 
TGGCTACCTC GCCCACGCCT CCGCTGTGTC AATCTTCCAC GAGCCACTGA GCGGAGAAAG 
AAGATCACTT GTGAATGGAT CGATGGATTA GGATTCCCCA TTAAGTTCTT TCCGGCATTT 
GATCGGCGGG AATTGGAAAA AGGCCGAAGT TTTTTCCAAT ACGAGGATTC AGCTGCCATC 
AACAAGATCG GACGCCCACT TACAGCAGGA GAAATTGCTT GTGCAAGTTC ACATGCTCTG 
GTAATACGTG AAGAAATGGA GTTCACGGGT CCTGAAGGAG TCATAATCCT CGAAGACGAT 
GTGACGCCTC GATGGGGTGC TGTCGATCTT TTCGAGCGAT TGAAAACTGC TGCCGCTGCC 
TTACCTGGTG TCGAAGCCAT CGCCTGTCAT GAAGCTTTGG ATTCTTGGGA ACGAGGTGAA 
AGCTGCGGAG AAGCCGTTCG AGCCCTGAGT CCACCCTGGG GAACGCATAT CACTTGGTAT 
AGCCACGCTG GCCTCTGTCG AGCCTATGAG TCGCTCATCA AGTTCGATCA ACCTGCGGAC 
TGGATCTGGC GAGAGTTCTG CTCGCGGGGA GCTTACGCTC TCCTCGATCC GCCAATCGCC 
CAACATCGGG GCGACTCGAC TTATGTGGGA AATGATTTTC GCGGAATGGT GCGACCCTAT 
CGGGAGTAG 

 

Protein sequence

MEYARAFVIV SDDRYFPGLQ AALGSIHAYY GQEIRVFVVG HGLTAPQVES LKNHPLGSAI 
TLLRTQDFAS RPSGCWEAKQ LCLSELVASV RTVCLMDADL ILLSRVDDIF ELAEQGKIIS 
SRDGEGMQFG PEYQVYSPAL VGPRQDYINS GFLIFDLRQH WDLVALWSFT ARFAGYSPGK 
GWPFAFPGHG DQGVFNALLA LQQKSDFLHA LPENTWCNSA GWKEGRKVRV THQEGNRLSV 
IHEPGGEQQR VLHSSGPKWW TDEGRTFFAS AGDVLRCFDA MRKITEPTMG SNKNLGISSP 
EERSKPALSV CVAIKNRSKV SVGLESRELF PNCIRSLLSA SAGGLKIELV VVDFQSDDWP 
LEEWFSNLVG DVAHQLITLR EPFSRGRGLN VAASAARSDR LLFLDADMLV DNSVLERAYE 
VVNSGRVWLP ICECVKSDGT FDSWGFLGNV ACDREVWNAA GQIPEFYSWG GEDNLFADRL 
QSIKPGIREV SLGFRHQWHP ESLRHAYYIR PAQSDFFRID QQATSPVQQL WRLSAHHPEW 
QGEIQFFTTG RMGRPGGMFG SFQASAEQLT LHWDSGHSDT FRWDSTVQRY VHDLLDFWLE 
PFTSLESMDI ERLLNRQVEA LSLEETPKSF KHLTIPLPDL LSRRDLLPRI LVFSSVGDRG 
IAVNSWLGIS SARQDRPFDT AIVYYGNYPT GDWAQGLRAR SCYFGRHRGG KIQNLSWLIK 
QHPTLLEDYD YVFVLDDDLR ITPDMIGRVV RTAREFDLPI CSPSHDWRGR ISWLHMGARG 
SGRRAAEPPA GVELTNFVEV TCPLFETDAL REYLNHFLWC GSELTGWGDD WLMTAACFQE 
SRPFGVLHNI TICNPKDRPG PNPQLREIDQ LHAVEERLTA WKRVKQRLGG RLPVTEEVRT 
WLPRPRLRCV NLPRATERRK KITCEWIDGL GFPIKFFPAF DRRELEKGRS FFQYEDSAAI 
NKIGRPLTAG EIACASSHAL VIREEMEFTG PEGVIILEDD VTPRWGAVDL FERLKTAAAA 
LPGVEAIACH EALDSWERGE SCGEAVRALS PPWGTHITWY SHAGLCRAYE SLIKFDQPAD 
WIWREFCSRG AYALLDPPIA QHRGDSTYVG NDFRGMVRPY RE