| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1039 |
|---|
| Symbol | |
|---|
| ID | 9137725 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 1311611 |
|---|
| End bp | 1312597 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003629080 |
|---|
| Protein GI | 296121302 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCCA CCATGAATTC CCTTCGCCCT CGAAAGACAC GACACATGGA ATACTCGCGA
GCCTTCGCAG TAATCTCGAA TTCCTGCTAT TTTTCAGGGA TTTTGGCCAC TTTGGGAAGC
ATCTACGCCT ACTACGGCCG CGACCTGCGA GTTTATGTCG TCGGGCATGG CCTCAGTGCC
GCAGAGCGAC AAATCTTGCA ATCTACTAAT CTGGGAGCTT CACTTACACT AATTGATACC
GAGGACTTTT CGCATCGACC GATCGGCTGC TGGGAAGCCA AGCAGCAATG CGCCAGCGAA
CTGGTGGGAT CCGTCAAAAC GATTTCGCTA CTGGACGCCG ATTTGATCCT GCTCTCCCGG
ATCGACGATG TCTTCGAGTT GGCCGAACGG GGTAAGATCG TGGCTCCGCT GGATTGCGGG
TCGATCGGAT TCAATACCGA CTACGATATT TATTCACGTC GACTCGCAGG TTGTGTCCGA
CCCAACCTCA ATACGGGATT CGTGACGTTC CATACCCGAA TGCATTGGGA TCTCGTCGCC
CTCTGGGCCT TTACCAGCCG GTTCGGTGCC TACTCGCCCG GCCGGGGAAT GCCCTTGAGC
TTCCCCGGAC ATGGCGATCC GGGGATCTTC AACGCACTGC TCTGCCAGCT GCACAAGGAC
GACGCCGTGC ATGTCCTGCC GGAGCGGACC TGGACGAATT CCGTGGGCTG GAACCGGGGG
CATGGTCTGC GGATCGTGGC TCGTCACGGC CATCAGATCA CCGCCGAACA TCAGCCGGGA
GGTCTTCGGC AGCGTGTCCT GCACAGCTCG GGTCCCAAAT GGTGGACCCC GGAAGGACAA
CGGGCTTTCA GCTCCGCCGG TGACGTGTTG ACCTGCTTCG AGGAGATGTC ACGCATCGCC
CTCCCCAACT CCCCCGCCAG TGAGCGAAGC ACGCCTCGCA CGACGGAAGC ACCCCCTTCC
GAAGTCTCGC TGGCCGTCTC CACCTAG
|
|---|
| Protein sequence | MKSTMNSLRP RKTRHMEYSR AFAVISNSCY FSGILATLGS IYAYYGRDLR VYVVGHGLSA
AERQILQSTN LGASLTLIDT EDFSHRPIGC WEAKQQCASE LVGSVKTISL LDADLILLSR
IDDVFELAER GKIVAPLDCG SIGFNTDYDI YSRRLAGCVR PNLNTGFVTF HTRMHWDLVA
LWAFTSRFGA YSPGRGMPLS FPGHGDPGIF NALLCQLHKD DAVHVLPERT WTNSVGWNRG
HGLRIVARHG HQITAEHQPG GLRQRVLHSS GPKWWTPEGQ RAFSSAGDVL TCFEEMSRIA
LPNSPASERS TPRTTEAPPS EVSLAVST
|
|---|
| |