Gene Plim_0895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0895 
Symbol 
ID9137580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1144981 
End bp1146273 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content54% 
IMG OID 
Product2-methylcitrate synthase/citrate synthase II 
Protein accessionYP_003628938 
Protein GI296121160 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGATTC GGCTCTATCG AGCGTTGATT CAACAAATTC GCCACTGCTA TACTCATGTG 
GTGACGACTT TTGTGTCAAT CACTGCTACC ACCGGATCAA TCCGCCAACA TCACCAGCCT
TTGCCTGAAC ACGAGAAAGC CCACCCAATG TCCGACGCTA CGCTCGACAA GGAAAAAATC
GCTGCCAAAG GTCTCAAAGG GATCGTGGCT GCTGATTCTC AAGTCTGTGA TGTGGATGGC
GATCTGGGCA AACTGATTTA TCGCGGCTTT AACATTCACG AACTGGCTGA GTCGAGCACG
TTTGAAGAAA CGTCTTACCT GCTTCTGCTT GGCGAACTCC CTACGGCAAC ACAACTGAAG
GAGTTTACTG AACTTCTGAT TCACCATCGT GAGATCGATG CCCCTGTTCT CGACTGTCTG
AAATCTTTGC CACCCAGCAC CCCGCCGATG ACAGCTTTGC GGACTGCGGT GTCGATCTCT
GGATGTTACG ACCCGCTGGC CGAGGACAAC TCGCGAGCCG CGAATCTGGA GAAATCTGTT
CGCCTCACAG CCGAAATGGC AACGATTACT GCCGCCTTCC GCCGCTTGCG AGAAGGTCTC
GAACCGATTG CTCCCCGCAA GGATCTCAGC CATGCGGGCA ATTTCATGTA TATGCTCAAT
GGGACAGTTC CATCCGAAGA TGCTACCCGA GCGATGGATC TGATTCTGAT TCTGCATGCC
GAGCATGGGC TGAATGCCAG CACGTTTGCC GCCCGTGTGA TTGCTGCCAC TCTGGCCGAT
CTTTACTCGG CTGTCACAGG TGCGATTGGT GCCCTCAAGG GGCCACTTCA CGGTGGTGCG
AATACTGAAG TGCTGAAGGT TCTCATGGAA ATCGGCAGCG TGGACAACGT GGCCAGCTAT
GTGGAAACAA CCCGGGCGAA CAAGGGCAAG TTCATGGGCT TTGGCCATGC GGTCTATAAA
GTGGAAGACC CACGGGCTCG CCATCTGAAA GCACTCTCCG AGCGACTGGG GAAAGAAACG
GGAGATCCCA AGTGGTACGA CATGTCGATC CTGATGGAGC GGCTGGTGCG TGAGTCGATC
AACCGATATT GCAACGTCGA TTTCTACTCG GCCAGTCTGC AGCACTATAT GGGGATTCCC
GGCGATCTGT TCACCTGTGT TTTCGCCACC AGCCGGATTG TCGGGTGGTG TGCCCATGTG
CTTGAACAAC TGGCTGATAA CAAGATCATC CGGCCCTCTT CGAATTACAT CGGTGCACCA
GAACGTCATT ACGTTCCCGT GAGCCAGCGA TAA
 
Protein sequence
MLIRLYRALI QQIRHCYTHV VTTFVSITAT TGSIRQHHQP LPEHEKAHPM SDATLDKEKI 
AAKGLKGIVA ADSQVCDVDG DLGKLIYRGF NIHELAESST FEETSYLLLL GELPTATQLK
EFTELLIHHR EIDAPVLDCL KSLPPSTPPM TALRTAVSIS GCYDPLAEDN SRAANLEKSV
RLTAEMATIT AAFRRLREGL EPIAPRKDLS HAGNFMYMLN GTVPSEDATR AMDLILILHA
EHGLNASTFA ARVIAATLAD LYSAVTGAIG ALKGPLHGGA NTEVLKVLME IGSVDNVASY
VETTRANKGK FMGFGHAVYK VEDPRARHLK ALSERLGKET GDPKWYDMSI LMERLVRESI
NRYCNVDFYS ASLQHYMGIP GDLFTCVFAT SRIVGWCAHV LEQLADNKII RPSSNYIGAP
ERHYVPVSQR