Gene Plim_0857 details

Gene Information

• Locus tag: Plim_0857
• ID: 9137542
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 1102003
• End bp: 1102770
• Gene Length: 768 bp
• Protein Length: 255 aa
• Translation table: 11
• GC content: 54%
• Product: protein of unknown function DUF107
• Protein accession: YP_003628900
• Protein GI: 296121122

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.925844
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACGGCT ACGCACTCTG GTCAATCCTG TTGCTGATCT TTGGTTTGAC CACATTAATT 
GCTGAAGTCT TCATTCCCTC TGGCGGGGCA CTAGCAGTCA TTACTGTCCT GGCGATTGTG 
GGCTCGTTGA TTTTTTCGGC CATGGCGTGG CTGTGGGCGG CACCACTCGT TTTCGCGGCT 
CATTTTGCTC TCGTTCTGGT GCTGGTGCCG CTCTGCCTGC TGGGGGCTCT TGAAATTCTC 
CCGAGAACAC GAGCTGGTAA GCGGATGATT CTGCAAGGGC CGGATGGTGA TCGATTGAAA 
GCGCCACAGG CATCGACGGA CGAAAAACTG GCTTCTCTGG TGGGACGCCA AGGGTTGGCT 
AGAACAGCAT TATCGCCAGG TGGATCAGTA ATGATCGACG ACGTTCGCTA CTCGGCCATT 
TCCGGAGAAT CGTTGATTGA CCCAGGTTCC CCGATTGTCG TCACGGGTTT ACGTGGATCG 
ACGCTGATTG TTTCCCCTTT AGCAAAGGAA TTGGTGACGA CCCAGCTCCC GGCTGGTTCA 
CCAGCTCAAT CCCTCCCGCC TGAAACGGAT CAAAGGACGA ATCTTCGGGA GGATCAAGTT 
TTTCCAGCAA CGGAGCCCGG ATCATCGACA ATTCAGGAGG CTCAGTTGCC AAACCCTGAA 
ACCTCGCCGT CCTTTCCACA GCCTTCTCCT GTGGTGGAGC TCGATCCATT CGCTCAACTG 
GCTGACGATC CTGATAACAT CGCCTCAGAT AACACGAAAG CGGTTTGA 

 

Protein sequence

MNGYALWSIL LLIFGLTTLI AEVFIPSGGA LAVITVLAIV GSLIFSAMAW LWAAPLVFAA 
HFALVLVLVP LCLLGALEIL PRTRAGKRMI LQGPDGDRLK APQASTDEKL ASLVGRQGLA 
RTALSPGGSV MIDDVRYSAI SGESLIDPGS PIVVTGLRGS TLIVSPLAKE LVTTQLPAGS 
PAQSLPPETD QRTNLREDQV FPATEPGSST IQEAQLPNPE TSPSFPQPSP VVELDPFAQL 
ADDPDNIASD NTKAV