Gene Plim_0836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0836 
Symbol 
ID9137520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1072126 
End bp1073316 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content54% 
IMG OID 
ProductGlutamine--scyllo-inositol transaminase 
Protein accessionYP_003628880 
Protein GI296121102 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCTA CGATCTCGCT CTCTTCGGGT TTAGTTTCAT CGGTACCCTT TATCGATCTT 
GTGCCGCAGC ACAATGCCAT TGCTGACGAG GTGATGGCAG CCGTCCAGAA AGTCTTCGCG
GAACAGCGAT TTATTCTGGG CGAAGAAGTG GTGGCGCTCG AAAACGAAGT GGCGACTTAT
TGCGATGCCC GATACGCCAT TGGCTGCAAC TCGGGAACAG ATGCTCTGAT CATCGCTTTG
CAGGCGCTGG GACTGAAGCC TGGTGATGAA GTCATCACTT CGCCATTCTC GTTCTTTGCC
ACGGCCAGTT CGATTGTTCG TGCAGGTGCC AAGCCTGTCT TCGTGGACAT CGACCCTAGA
ACGTTCAACC TCGATGCACA AGCTGTTGAA GATGCGATCA CTCCCAATAC CAAAGTGATC
ATGCCGGTGC ATCTGTTTGG CCAGTGCTGT GATATGGAAA CTCTCAATCG TCTGGCAACC
AAGTATGGTC TGTCGATTGT GGAAGATGCC GCTCAGGCGA TTGGTGCGGA GTACCAGGGT
CGTAAAGCGG GTGTTCTCGG AAATGTCGGC TGCTTCAGCT TCTTCCCGAC CAAAAACCTG
GGTGGTGCTG GTGACGGCGG AATGATGACG ACTGATGATC CCGAACTGGC AGCGCGACTC
AAGCGATTGC GGGTGCATGG CGATATCGGT CAGTACGAAC ATATTGAAGT GGGTATGAAC
AGTCGTCTGG ACGCACTTCA GGCTGCGGTT TTGCGAGTCA AACTGCGGCA TCTCGAATCG
TGGACTGTCG CACGTCAGAA AAACGCGAAA CGATATGCTC AAATGCTGAC TCAGGCTGGT
CTGACCGATT CGCTGGTCAT GCCCTCCAGC GATGCCACCG GCCGCCACGT TTACAATCAG
TACTGTGTGC GAGTGAAAGA TGGCCGCCGC GATGAAATTC TGAAAGAGCT TCGCGGTCGT
CAGGTCGGCT GCATGGTCTA TTACCCGAAA CCACTGCACC TCCAGACCTG CTTTGCCCCA
CTCGGATATC AGGCTGGTCA GTTCCCGGAA GCGGAAAAGG CCTGCCAGGA TATTCTCGCA
CTCCCGATTT ATCCCGAACT TCCCGCTGCC CACCAGGATC GTGTGGTTTC GGCTCTCGTC
GAAGTTTGTC ACGGTGTGAG CGAATCTCAG GTCATTCGCA AAGCTGCCTA G
 
Protein sequence
MTATISLSSG LVSSVPFIDL VPQHNAIADE VMAAVQKVFA EQRFILGEEV VALENEVATY 
CDARYAIGCN SGTDALIIAL QALGLKPGDE VITSPFSFFA TASSIVRAGA KPVFVDIDPR
TFNLDAQAVE DAITPNTKVI MPVHLFGQCC DMETLNRLAT KYGLSIVEDA AQAIGAEYQG
RKAGVLGNVG CFSFFPTKNL GGAGDGGMMT TDDPELAARL KRLRVHGDIG QYEHIEVGMN
SRLDALQAAV LRVKLRHLES WTVARQKNAK RYAQMLTQAG LTDSLVMPSS DATGRHVYNQ
YCVRVKDGRR DEILKELRGR QVGCMVYYPK PLHLQTCFAP LGYQAGQFPE AEKACQDILA
LPIYPELPAA HQDRVVSALV EVCHGVSESQ VIRKAA