Gene Plim_0825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0825 
Symbol 
ID9137509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1062685 
End bp1063560 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003628869 
Protein GI296121091 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCTAA ACTCCTTACG ATGGACAGCA TTCACGCTCG CTCTGCTGAG TCTGGCGGGT 
TGGCCTGACT GTGCGTCAGC TCAGGAAGCG GGTTTTCTGG ATCGCTCTCT GCTGGCAGAT
CCGTCGATCG TTTTCAGTCC AACGTCTGGC GATGAAATCG AAACCGATCG CGACTCATTT
ACACCGGCAA CGACAGTGGT GGGCCACCAC AAAACGATTG TCGAAGCGGC TTACTCGTTC
ATTGATAATC CCTCCAGCCG GGAGACACAC AGTTTCCCGG AATTGCTGGT TCGATATGGC
GTGAGCGACC GCATTGAAAT CCGGCTGGGA TGGAACTACG AGACGGGTGG TGGCGGTTCC
GTCAGTGGGA ATTCTTCGTT CATCGAAGAA GAACCATTGG TTGATGAGAT CGAGAACGAC
GGAGATCTGC TCTATGGATT GAAGCTGTTT GTGAATGAAC AGGCCGACTG GCTGCCTCAA
TCCTCGCTTA TTGTGCAGGC CAATACTCCG ACATCCGGGA GTCTGAATAC GACACAATTC
ACACTCTGCT ATGTGGTGGG TTGGGAATTG CCGAATGCGT GGACGATTGA CGCCGCCATG
CGCTATTCAG CCACCGCCGA AGAGGAAGAT CATTTCAATC TGTGGGCTCC GTCTGTGGTG
CTCAAAGTTC CTGTCGGAAC AAAATATAAA GCCCATATCG AATACTTTGG CATCTTCTCG
GATCAGCAGG AGACAGCGCA GACCTCACAA TACATCAGCC CGGGAATCCA CTATCTCATC
ACACCAGATC TGGAAATCGG AATTCGTGTG GGCTGGGGAC TCAACAGCGA CTCAGCACGA
TTCTTCTCGA ATGTCGGTGC CGGCTGGCGA TTCTAG
 
Protein sequence
MPLNSLRWTA FTLALLSLAG WPDCASAQEA GFLDRSLLAD PSIVFSPTSG DEIETDRDSF 
TPATTVVGHH KTIVEAAYSF IDNPSSRETH SFPELLVRYG VSDRIEIRLG WNYETGGGGS
VSGNSSFIEE EPLVDEIEND GDLLYGLKLF VNEQADWLPQ SSLIVQANTP TSGSLNTTQF
TLCYVVGWEL PNAWTIDAAM RYSATAEEED HFNLWAPSVV LKVPVGTKYK AHIEYFGIFS
DQQETAQTSQ YISPGIHYLI TPDLEIGIRV GWGLNSDSAR FFSNVGAGWR F