| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0772 |
|---|
| Symbol | |
|---|
| ID | 9137455 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 1001277 |
|---|
| End bp | 1002278 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | dihydroorotate dehydrogenase family protein |
|---|
| Protein accession | YP_003628816 |
|---|
| Protein GI | 296121038 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCTG GTTCAAACCG TGTTTCCTTC ATCAAAAAGT CTTCCGTGAT GTCATTGACT
TCGAATCTGC CGGTGTCTCT CAATGTTCAA CTGGGAAGAT TGTCACTTAA GAACCCGATT
CTTGTGGCCT CTGGAACATT CGGCTACGCC CGCGAAATGT CGGCATTTGT CGATTATGCT
CAATTGGGAG GGATCATTCC CAAAACGGTC ACTCGCGAGC CGCGCGCTGG AAATCCCCCA
CCGCGAACTG TCGAAACGAC GGCAGGTCTT TTGAATTCGA TTGGCCTCGA TAACGACGGC
ATCGAAGTCT TTATCACCAA GCATCTCGAA GCTCTTTCGC TGCTGCCGAC GGCGTTAATT
GTCAACATTG CCGGGAAGAG TACCGACGAC TTTGTTGTGA TGGCTCGGCG ACTCGATGAG
TTCAATGCGA TTCAGGCGCT GGAGCTGAAT ATCAGTTGCC CGAATGTCAG TGGCGGAGTC
GATTACGGTA CGAATCCGAC GATGACAGCC GAAGTCGTGG CTGCGGTGCG GCAAGCGACA
TCCAAGCCGA TTATTGCCAA GTTGACACCG AATGTAACGA GCGTCGTGGA GATTGCACGT
GCGGCCGCAA GTGCCGGGGC CGATGCCCTT TCGCTCGTCA ATACGTTTCA GGGTTTTGCC
GTCGATTGGA AAACGGGCGA GCCACGGCTG GGGAATGGTC TGGGGGGACT CAGCGGCCCA
GCGATCAAAC CTCTGGCGTT AAGAATTGTC TGGCAGGTCG CGCAGGCGGT GGACTGCCCG
ATCATTGGCG TCGGCGGGAT TCAATCACTC GATGATGTCC TCGAATTTCT GGTCTGCGGA
GCGACTGCTG TGCAGGTGGG AACGGCGAAC TTTTACAATC CATCGTTGTC GAGTCAGTTA
ACGAGCGGGT TGGAAAAAGT TTTGCAGGAT CGAGGTTGTT CACGAGTTCA GGAACTCATC
AAAACCGTCA AAGTTCCCAA GAATCAGCGG AAAACCTGCT AG
|
|---|
| Protein sequence | MTPGSNRVSF IKKSSVMSLT SNLPVSLNVQ LGRLSLKNPI LVASGTFGYA REMSAFVDYA
QLGGIIPKTV TREPRAGNPP PRTVETTAGL LNSIGLDNDG IEVFITKHLE ALSLLPTALI
VNIAGKSTDD FVVMARRLDE FNAIQALELN ISCPNVSGGV DYGTNPTMTA EVVAAVRQAT
SKPIIAKLTP NVTSVVEIAR AAASAGADAL SLVNTFQGFA VDWKTGEPRL GNGLGGLSGP
AIKPLALRIV WQVAQAVDCP IIGVGGIQSL DDVLEFLVCG ATAVQVGTAN FYNPSLSSQL
TSGLEKVLQD RGCSRVQELI KTVKVPKNQR KTC
|
|---|
| |