| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0745 |
|---|
| Symbol | |
|---|
| ID | 9137428 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 968597 |
|---|
| End bp | 969598 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF1559 |
|---|
| Protein accession | YP_003628790 |
|---|
| Protein GI | 296121012 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCGAT CGAGTGACCT GGGCGTCGCT TCCATGTTCT GGTGGCCTGA AGTCATTTTA
TCGATTGCTA TTGGCCTGGT GATTTGTGGA ATCGCCGTTC CCGCAGTTCT GAATTCTCGC
GAGAGTCAGC GTAAGGTTTT GTGCCAGCAA AGGTTGTCGC GTTTGTCCAC GGGATTGGCA
GCCCATGAAT CGGCTTATGG CACATTGCCA CCTGGTGTGC TCTGGGGAAG ATTTCAATAC
GACGCGCCAC GGACCACCTA CTATGCCAAT CTTCTAGAAG TTCTCGGAGA AGGAACGCTT
TTGCCGGTTC CAGGCGTCAC ATGGTGCTCG TCACAAAACG AACATGTCAC CAGCATGCCC
CGGCCGGAAC TGCTCTGTCC GTCAGATTTG CGAGGCGGAG CCGTCAAGAA CAATCTCAAG
TGTGGCGACC AGGCCATGAC CAACTATATG GCCTGTTTTG GTCGAACGAT GGCTGATGTC
GCCCTCAAAC GTGGACCATT CTTTGCGAAT TCAGGACTCG ATCTGAATCG TGTGGAGCGT
GGCCGAGCTT CACTGCTGCT CATGGCTGAG TACATCACGG GAACACCTAC TGACCTTCGT
GGCGGTCTCT GGGGCGATGA AGCGGGCATG AGTCTGATAT TCACCTCTTT GCCTCCCAAC
AGTCCTGTAC CCGACAGGCT GTACCCGAAT CCGAGGCTCT GTGATCCACA GAATGCAGTC
CACAACAACG TGAAAGCCAA CATGCCCTGT GCGCATGGTG ATGGCTACCT GACAGATACC
GCAGCAGCCC GGAGCCATCA TGCGGGTGGT GTGCATGCGC TGTTTGCTGA TGGACGAATT
CAATTTGTTT CGAGTCGGAT TGATCGTGAG CTATGGCAGA ATTATGGAGT CACGCATCCT
GAGTCGGCAG CATGGGAGAC TGCAAGCCTC TCAGAACAGG AGATTGATAA GCTCAAATTG
CCTTCAGGAA AGCTTGCCTC CAGTCAGATG ACGAGGGAGT AA
|
|---|
| Protein sequence | MDRSSDLGVA SMFWWPEVIL SIAIGLVICG IAVPAVLNSR ESQRKVLCQQ RLSRLSTGLA
AHESAYGTLP PGVLWGRFQY DAPRTTYYAN LLEVLGEGTL LPVPGVTWCS SQNEHVTSMP
RPELLCPSDL RGGAVKNNLK CGDQAMTNYM ACFGRTMADV ALKRGPFFAN SGLDLNRVER
GRASLLLMAE YITGTPTDLR GGLWGDEAGM SLIFTSLPPN SPVPDRLYPN PRLCDPQNAV
HNNVKANMPC AHGDGYLTDT AAARSHHAGG VHALFADGRI QFVSSRIDRE LWQNYGVTHP
ESAAWETASL SEQEIDKLKL PSGKLASSQM TRE
|
|---|
| |