| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0701 |
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| Symbol | |
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| ID | 9137383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 920574 |
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| End bp | 921923 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | sigma-54 factor interaction domain-containing protein |
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| Protein accession | YP_003628747 |
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| Protein GI | 296120969 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATACA CCCGCAGTGT GCTGATCGTT GAAGACGAAG AGATCATCCG GACATCGCTG
CTGGAGTTTC TGACGGATGA AGGCTATCAG GCCATGGCGG CCCCCAATGT GGCCACGGCT
TTGAAGCTGG CTCGAGAACG TGAGTTTCAA GTTGCGGTCT GTGATGTTCA GCTCCCGGAT
GGTGATGGTC TGGCGCTGCT CCGCAAGCTG CAGCAGATTA CGCCCGGAGT TTCCGGCTTG
ATCATCACGG CCTACGCCAC AGTCGAGAAT GCGGTCGAAG CGTTTAAGTC CGGGGCTTTT
GATTATCTCG TCAAGCCGGT GATCTTCGAT GATCTCGCCA ATAAGCTGGC CAGACTGTTT
CAATACCGCG ATCTGTATCT CGAAAACCAG ATCCTAAGGC GCGAGTTAGC CCGCCGGGAT
GATGGCGATG AGATTGTCGG TTCCAGCACG ATTCTGCGCG AAGTTCAGGA TTCTGCCCGA
AAAGTGGCTT TAGCCAATGC CAATGTGCTG CTGGTGGGTG AATCCGGTAC CGGGAAAGAA
CTATTTGCCC GCATGATCCA TAAGTGGGGG CCCAAAAAAG ACGAGCGGTT TCTGGCGATT
CATTGCGGTA TGCGCCCGAT TGAAATGCTT GAGAGCCAGC TCTTTGGAGC AGCGGCGGGA
ACAATTCCAG GGAGTGGTGA ACAATCGGGA GCGTTTCGGT CTGCGGAGAG CGGCACTGTC
TACCTGGATG AAATCACTCT GCTGCCACTA GCCATGCAGG CCAAACTCGT GCGAGCTATG
GAATACAGTG AGGTACTCCC GTTAGGAAGC GCTGATGCCG CCAAAATTCA CTGCCGTATC
ATCGCGTCGT CGTCGCGCGA CCTGGCACAG GAGATTGCTG AAGGACGCTT TCAGGACGAT
CTGTTCTACC GGCTGGACGG AGTGAAGTTG CTTATTCCTC CACTTCGAGA CCGGCTCGAC
GATATCCCGG AACTGGTCGA TTTTTTTATC GCCCGCCACA GCAAAGTGAT GAATCGCCGC
GTGACCAGTG CCACCAGTGA AACGATCCGC CTGTTGCTGA CTGCGAACTG GAAAGGGAAT
GTCCGGCAGC TCGATAATGC CATTCAACGG GCGGTTATGC TCTGTGATTC AACGCAGATT
ACGCCCAAAG ACCTGCCACC AGATCTCGTG GGAATCTCTC AACCACTGCC TGATACCGAT
GATCTGCGAA CAGCGATTCG TCACTACGAG AAGATGCATA TTCTTCGAGT TCTAAAGCTT
TGCCCCGACA AACGAGAAGC GGCAAAACGA CTCAAACTGG GCCTGTCGAG CCTCTACCGA
AAGATCGAAG AACTCGGGAT TGATCTGTAA
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| Protein sequence | MKYTRSVLIV EDEEIIRTSL LEFLTDEGYQ AMAAPNVATA LKLAREREFQ VAVCDVQLPD
GDGLALLRKL QQITPGVSGL IITAYATVEN AVEAFKSGAF DYLVKPVIFD DLANKLARLF
QYRDLYLENQ ILRRELARRD DGDEIVGSST ILREVQDSAR KVALANANVL LVGESGTGKE
LFARMIHKWG PKKDERFLAI HCGMRPIEML ESQLFGAAAG TIPGSGEQSG AFRSAESGTV
YLDEITLLPL AMQAKLVRAM EYSEVLPLGS ADAAKIHCRI IASSSRDLAQ EIAEGRFQDD
LFYRLDGVKL LIPPLRDRLD DIPELVDFFI ARHSKVMNRR VTSATSETIR LLLTANWKGN
VRQLDNAIQR AVMLCDSTQI TPKDLPPDLV GISQPLPDTD DLRTAIRHYE KMHILRVLKL
CPDKREAAKR LKLGLSSLYR KIEELGIDL
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