| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0644 |
|---|
| Symbol | |
|---|
| ID | 9137324 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 836210 |
|---|
| End bp | 837217 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003628690 |
|---|
| Protein GI | 296120912 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGGTCAC AGCCAGGTTT TGCAGCCCGA TCCAAGCCCC AATCTCTTCA ACGGGGGTTC
GAGGATCGCT TGCGATGGCT CCCCATGCTG CTCGTGCTGA CGACGGCCTC AGGATGTTTT
CAGAGTGATT ACAGCGATTA CAAGACATTC GGTGATGCAG ATCTGGTGAA AACCGCACCA
GAGGCGAGCG GACAAAGTGA AGACCAGGCA GAATCTCAGG TCGCAACGTC CAGCAAAGAA
CCGTCTCAGA CCGAACGAGC CTCTGTCGGC GCTGATAAGC CACAAGCTGC TGATCCTCAG
GCAACGACTG CCATCGTGGC TGATGCAGGG GCCGCTGAAA ACCTTGCCAG CGCCGATGGA
AAGATGACAC CCGTCCGGCC AGAAACCAAA GCGAGCAGCC TGCGCAGCGA TCTGATTTTG
GCTCCCGAAG CAGGGTTTGA ATCCAGGACC GCATCGGCAC CTGCTTCGGC TCTCAAAGCA
GCTAACAGTT CCAATGTTGA TCAGCGAGGT TCTGAGGTGT TGCCGGCTGA TCAGGCCGGC
AACAGTTCCG AAACCCCCGT TTTGCGGGAA GTGAAGCTGC TGATTCCGGA AAAGCAGTTC
AGTGCTGAAG GGAAAGATCA GGCACTGCGG GTCTCCTACG ACGATCTGGA TCTGCTCAAG
GTTCTGAATA TGGAACCTGT GACCGATCAA TGTGTGGAAC TGATGCCCGA TTGGCTTAAA
CAACTCAATG GGCAAAAGGT GCGTATTCGG GGCTTTATGT ATCCCACGTT CGAGGCGACA
GGGATTACTG AGTTTGTGCT GGCTCGTGAC AATCAGATTT GCTGTTTTGG TCGAAATCCC
AAAGTTTACG ACCTGATTGG TGTGAAGATG GCAGCGGGAA AAACCACGCA CTACATTCCC
AATCGACCAT TCGATGTGAC CGGAACCTTT GTGATTGAAA AGGCCTCGGC TGAAGGCGAG
ATTTTTGGGC TGTACTGGAT TCGTGACGCT GTCATTAACG AGCGCTGA
|
|---|
| Protein sequence | MWSQPGFAAR SKPQSLQRGF EDRLRWLPML LVLTTASGCF QSDYSDYKTF GDADLVKTAP
EASGQSEDQA ESQVATSSKE PSQTERASVG ADKPQAADPQ ATTAIVADAG AAENLASADG
KMTPVRPETK ASSLRSDLIL APEAGFESRT ASAPASALKA ANSSNVDQRG SEVLPADQAG
NSSETPVLRE VKLLIPEKQF SAEGKDQALR VSYDDLDLLK VLNMEPVTDQ CVELMPDWLK
QLNGQKVRIR GFMYPTFEAT GITEFVLARD NQICCFGRNP KVYDLIGVKM AAGKTTHYIP
NRPFDVTGTF VIEKASAEGE IFGLYWIRDA VINER
|
|---|
| |