Gene Plim_0643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0643 
Symbol 
ID9137323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp835115 
End bp835981 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003628689 
Protein GI296120911 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATGA GTGCCGTGAA CTCTGCAGTG ATTGACCCAG GCTCCGACAC CGTCGAAGTG 
GCTGGCCAAA TTTCCCCATT GGATCGCCCC GGAGAGGTGG ATTGCCCCGG AGAAGCGCTG
CCTGTTGAAA GGTTGGACGA GAAAAGGGTT GCGACAACTC GTGTGAGTTC ATTGGGCCTC
GAATTGCCTC AAGGTGGCTA TTCAGAAGAA GAGTTTTCTT ACCGCCCCGT TCCAGTGCTC
GTTTCGATCT CCGCAGGCCT GGTGATTCTG GGTCTTTCGT CGTTTTTGAC AGAATGGATG
CTGGTTTTGC CCTTGCTGGG GATGTTTGCA GCCCTGATGG CGCTACGGAA GATTCGCAAC
TCCGAAGGAG CCTATTCTGG TGCCGGAGCC TGCAAAGCGA TGATGGTCTG TGCGTCGCTG
ATCATCGCGG GGGCTGGCTC GCTGCATGCG ATGGCCTACA TTACGGAAGT CCCCGAAGGG
TATCAGCGGG TGAGCTTTGC TTCGGATATC AGCGCTCACG GCATGAAGGT GGTTGAAGGG
AAGGTGGAGC TTCCCGATGC TGTTCAGAAA CTGCAGAACC AACCGATCTT CATCAAAGGC
TACATGTACC CTTCCAAGCA GACGGCTGGG ATTACCAAGT TTTTACTCTG CAAAGACAGT
GGGGATTGCT GTTTTGGTGG AGCACCCAAG CCAACGGATA TGATTCTCAT CAGTGTTCCC
AAAGAGAAAG CTGTGGATTT TTCTCCCGGA CTCAAAGCGG TGGCTGGAAC ATTTACATTG
GCAAATGGAG CCGAAGCTGA CGGGCAGTCA CCGGTTTATC AGTTGAATGC CGATCAGTTT
TACAGTCCTG CCCGTACGGC TTATTGA
 
Protein sequence
MNMSAVNSAV IDPGSDTVEV AGQISPLDRP GEVDCPGEAL PVERLDEKRV ATTRVSSLGL 
ELPQGGYSEE EFSYRPVPVL VSISAGLVIL GLSSFLTEWM LVLPLLGMFA ALMALRKIRN
SEGAYSGAGA CKAMMVCASL IIAGAGSLHA MAYITEVPEG YQRVSFASDI SAHGMKVVEG
KVELPDAVQK LQNQPIFIKG YMYPSKQTAG ITKFLLCKDS GDCCFGGAPK PTDMILISVP
KEKAVDFSPG LKAVAGTFTL ANGAEADGQS PVYQLNADQF YSPARTAY