Gene Plim_0629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0629 
Symbol 
ID9137309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp815772 
End bp816470 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content51% 
IMG OID 
ProductPirin domain protein 
Protein accessionYP_003628675 
Protein GI296120897 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.415085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAGG TACGTCGAGC TGAGGATCGC GGTTATTTTG ATCATGGCTG GTTGAAGACG 
GCCCATACGT TCTCATTCGG CCATTACTTC GACCCGGGCT GGAATGGCTT TCATACACTC 
CGGGTCATCA ACGAAGATGT GGTGGCACCA GGCCAGGGGT TTGGGATGCA TGGCCACAAA 
GATATGGAGA TCGTCACCAT TGTGCTTCAG GGTGAACTGG AGCATAAAGA CAGTCTGGGC 
AATGGAGAAG TTCTCCGCCC GGGCGAATTG CAGAGAATGA CAGCGGGCAG CGGTATTCGT 
CACAGCGAAT TCAACCCCAG TTCGAGTCAA CCGACACATC TATACCAGAT CTGGCTGTTT 
CCTGAGGAGA AAGATCTCAC ACCAGGTTAT GAGCAGAAGC CATTTCCACG TGAAGAACAG 
TTGAATCAAT GGCGATTGGT GGCTTCACGA GATGGCCGCG ATGGCTCGCT AACTATTCAG 
CAAAAGGCGA ATCTGTGGCT GACTGATCTC TCAGCAGGTC AATCGCTGCG AAAAGACCTT 
TCGACTTCGC ACAAAGGATG GTTACAAATC CTGAAGGGTC AATTCCTGAT CGATGGCCAC 
GAGGTGCAGG AAGGGGATGC TCTCTACTGG AGTGAAGAAG ATCGCCTCGA TGTGGTCACG 
AAAGCCGATG GCCAGTTGCT GCTCTTTGAA CTTGAATAA
 
Protein sequence
MKQVRRAEDR GYFDHGWLKT AHTFSFGHYF DPGWNGFHTL RVINEDVVAP GQGFGMHGHK 
DMEIVTIVLQ GELEHKDSLG NGEVLRPGEL QRMTAGSGIR HSEFNPSSSQ PTHLYQIWLF 
PEEKDLTPGY EQKPFPREEQ LNQWRLVASR DGRDGSLTIQ QKANLWLTDL SAGQSLRKDL 
STSHKGWLQI LKGQFLIDGH EVQEGDALYW SEEDRLDVVT KADGQLLLFE LE