| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0617 |
|---|
| Symbol | |
|---|
| ID | 9137297 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 797358 |
|---|
| End bp | 799250 |
|---|
| Gene Length | 1893 bp |
|---|
| Protein Length | 630 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003628663 |
|---|
| Protein GI | 296120885 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0646208 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACTGTCA CACTGATGCA GAATTCAGCC TCTGAACCAT TCGAAAAGCT GCAGTTGCCA
ACCAACTCTG GGGTGCCCAT GAAATGGTCG GCAACATCTC AACTGATCAG TCAGCTCAAA
GAGGGGACGT TGCCACTCCG CGAGTGGATC TTGAATGGCA CTGCGAAAAT TGCCAAAAGC
GGGCCGCATC GAGTTGTCTA TCGAGTGAAT TTGAACGACC GTGCGGTGTA CATCAAGCAG
TACCTGACGA ATGATCGCAA GTCAAAACTG CGGACCTGGC TTTCGGGAAC TAAAGCGGCG
CGAGAGCTTT CTGTCCTCCG GGCGATGCAG GCGGCCAATC TCCCGGTTCC CTTACCACTG
GGGATCGGTG AGCCAGTGAC ATCTCGATCC CGACCAGTCG ATACACCAGC AGAAACCTCG
ACAACATCTG AGCTGAATTT ATCGTTTCTT GATGATCCGC AGAGCAGTTT TCTGGTCTTG
GAAGCGATTG AGCCCACCAT GTCGCTGGCC AATCTGATGC TGCGCTTCAG CGATGTCATG
CAGTTCGACA AACTCGGCAT TCGAGGTCGG CAGCATCTGT GTGTGACAGT GGCTCGCATG
GTCGCGCGGC TTCACAAGAA TAGGTTTGTG CATCGCGATC TGCAGGCAGA AAATCTGCTG
ATTGCTCCCG TTCAAAGTCA TGGCCCGATG CGGATGTGGT GGGTCGATTT GAGTGATATC
CGCCAGAAGT GGCTGAAGGT TTCTCCCCAG CAGATTATGC TCAATCTGGC GATGCTGAGG
CATTCTCTGC ATCGCCATCT TTCCAGTACC GACCAGCTGC GATTTCTCGC GGCTTATCTG
ACGGAACTGT CGAATCCTCA AGCAGCTGGC GCTGGAGAGA TTTCCGAAGC TGAGCCCTCT
GATCCTGCGG CTGTCGGTGA TTCTGTCGAT TTTCTGATTG CCCCAAAGCG TAAAAAGCTG
AATGAGTTAT CGCTGCCCCA TAGCCTGCAG ATTTCGAAGC CAAAGCTCAA AAACTGGATT
GTGCAACTGA AGCAGGTGAC GCAAAGCTAT TCTATCCAGG CGTGGAAGAA GGCGGATCGC
AAGTGGCGAC GCGGAAACCG CCGCCTGCAT ATCGCTCAAG TGGGTGCACG CTCCGGCCGC
TGTGTCGCGG GTATGGATGC TCAGTTGCTG AGACATCTCA CCAGCAAGCC GTCTCAGCTT
TTTTCACCTC CTTATCTGGT GCAATCGACC GAAGGGGCGG CTTTACAAAA AACGGCGATC
ATTCAGCTTC CCGTTTCCGG TTCGGTGATG CAGGCCGAAC TTGTGGCTCG CCCTCTGGTT
CGAGATGCTC ATGATTCCTG GGCACGTCGA TCGTGGGAAA ACGCCTATGC TCTGATGAGG
CGGGGGTTCT CGACACCGGG GCCACTGCTT TATGTGGAGA CTGAGACGGA GCAATATCTC
GCCCGGGCTT ATCACAATAA ACAAAAGACA ATCGCGGACT GGATCAGTGA TCAGGGGCGG
CTCTCGTTCC TGCCACAATC TGATGAAGTT CAGGTGGCCC ATCGAGTTCT GGATACACTC
GCCCGGTTGT TTCTATATGG TTTTAAGCCG GAAATCACCG ATCTGGAGCA GTTTTTCGTC
ATCAAGCTGA ATGGCCGCGT GTTGATTGCT CTGGCTGATC CTTCGCGGTT TGAGCAGCGA
GAATCGGTGT CTTTCAAGCA GATCGCCGCC TCGCTGCGTG AACTGCACGA CGCGACCATC
GTGATGACCA ATCTGCGGAC ATCCACCTGT GCCCGCTGGC TTAAGCGGGT GGCGTGTAAG
CTTCCTCCAC TCACGTGGCG CATGCTTATG AGTGAAATCG TTAAGCAACG TCGCGACCGA
ATCGAAAATT ATCGAAAGTG GCATGCCGCA TGA
|
|---|
| Protein sequence | MTVTLMQNSA SEPFEKLQLP TNSGVPMKWS ATSQLISQLK EGTLPLREWI LNGTAKIAKS
GPHRVVYRVN LNDRAVYIKQ YLTNDRKSKL RTWLSGTKAA RELSVLRAMQ AANLPVPLPL
GIGEPVTSRS RPVDTPAETS TTSELNLSFL DDPQSSFLVL EAIEPTMSLA NLMLRFSDVM
QFDKLGIRGR QHLCVTVARM VARLHKNRFV HRDLQAENLL IAPVQSHGPM RMWWVDLSDI
RQKWLKVSPQ QIMLNLAMLR HSLHRHLSST DQLRFLAAYL TELSNPQAAG AGEISEAEPS
DPAAVGDSVD FLIAPKRKKL NELSLPHSLQ ISKPKLKNWI VQLKQVTQSY SIQAWKKADR
KWRRGNRRLH IAQVGARSGR CVAGMDAQLL RHLTSKPSQL FSPPYLVQST EGAALQKTAI
IQLPVSGSVM QAELVARPLV RDAHDSWARR SWENAYALMR RGFSTPGPLL YVETETEQYL
ARAYHNKQKT IADWISDQGR LSFLPQSDEV QVAHRVLDTL ARLFLYGFKP EITDLEQFFV
IKLNGRVLIA LADPSRFEQR ESVSFKQIAA SLRELHDATI VMTNLRTSTC ARWLKRVACK
LPPLTWRMLM SEIVKQRRDR IENYRKWHAA
|
|---|
| |