Gene Plim_0539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0539 
Symbol 
ID9137217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp676105 
End bp676803 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content58% 
IMG OID 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_003628586 
Protein GI296120808 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGCGG TTTTGGCGCT AATGATCACC TTCATATCGC TGATGGGCTA CGGTTGTGGC 
GCGATCAAAG AGACTGCACC TGAGCGTTCC TCCACCACGG TGACAACCCA CGAGGGTGGG 
GCCGACGTTG ATTCCTCCGT CATCACGTTC CACGACGAGG TCATCAGTCA GGACACCCCG 
GTTGTGGAGC TGTCAAGCCT CGAACTCACG ACGCCCGACG GGAAACCCGT TCGGTTGAGT 
GACTTTCTTA AAACTGGCAA TCTTGTGGTC GTAGTCACGA GCGGCTACGC CGGTTCGATC 
TGTCCGGTCT GTTCGACACA GACTTCGAGG TTCATCGCCA ACCATGAGGC GATCAAGTCG 
CGCGGTGCCG AAGTCGTAGT GATCTATCCG CTCGGCAGTG AAAACGATCG CTCCCGCAGC 
GGCGAATTTC TGGCAGCCGC GAACAAACGG GTCGCGTTGG CTCCCGGCGC TCAACCTTCC 
TTCCCCTTGT TAGTAGATGT GGGGCTGAAA GTGGTCGACC TTTTGGGTAT TCGCCAGGAT 
TTATCGAAAC CCGCGACCTA CATTCTGGAT CGAACCGGCG CGATTCGCTT TGCTTATGTG 
GGCGAGAGTA TGGCTGACCG TCCCTCGGTC CAGGCGATCC TGCGGCAACT GGATACCCTC 
AACACATCGA TGACGAACGC CGCCCGGGTG GGCACATAG
 
Protein sequence
MRAVLALMIT FISLMGYGCG AIKETAPERS STTVTTHEGG ADVDSSVITF HDEVISQDTP 
VVELSSLELT TPDGKPVRLS DFLKTGNLVV VVTSGYAGSI CPVCSTQTSR FIANHEAIKS 
RGAEVVVIYP LGSENDRSRS GEFLAAANKR VALAPGAQPS FPLLVDVGLK VVDLLGIRQD 
LSKPATYILD RTGAIRFAYV GESMADRPSV QAILRQLDTL NTSMTNAARV GT