Gene Plim_0524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0524 
Symbol 
ID9137201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp654860 
End bp655468 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content48% 
IMG OID 
ProductRNA polymerase sigma-70 factor 
Protein accessionYP_003628571 
Protein GI296120793 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACTT CACCGTCTGA GCAATTTGAG CCTCAAGTCA ATCCTGGTGA GGGGGTTGAG 
GCGTTGACTT TTCAGAAGGA CAACGGCTCT GAACCAGCTT CACAGGCTGA GTTTGTGCAG 
CTGTTTACAA GATCTCAAAG ACGATTGTAC TTATATATAT TGTCCCAGGT GCCGCATCCG 
GTTGAAGCTG AAGAGATTCT GCAGGAAGCC AATGTGATCG CCTGGACAAA ATCGTCTCAG 
TATCGCAGTG GCAGTAATTT TTTTGCCTGG GTCTGTCAAA TCGCCCACTT GGAGATACTT 
AAGCATCGCA GTCGGCAGAA GCGAACGAAA CTCAGATTCA GCGATGAGTT TATTGAGCAG 
GTGGCCAGTG AGGTGGTCGA ACAGGTGGAT GAACTGGAGT CTCGTCGGCT GGCTTTAAAA 
CATTGTCTGG GAAAATTAAG AGATAAAGAC CGAGATCTGA TTGAGTCCCG CTATGCTCCT 
GGTGAGCGTG GTAAAGATCT GGCTAGCCAG ATTGGGCGAC CAGCCAATTC GGTCTATCAA 
TCATTGGGAA GAATTCGCCG TACACTCATG GAATGCATTC AGCGGCAACT GGCCGTTGAG 
TTTCATTGA
 
Protein sequence
MSTSPSEQFE PQVNPGEGVE ALTFQKDNGS EPASQAEFVQ LFTRSQRRLY LYILSQVPHP 
VEAEEILQEA NVIAWTKSSQ YRSGSNFFAW VCQIAHLEIL KHRSRQKRTK LRFSDEFIEQ 
VASEVVEQVD ELESRRLALK HCLGKLRDKD RDLIESRYAP GERGKDLASQ IGRPANSVYQ 
SLGRIRRTLM ECIQRQLAVE FH