Gene Plim_0295 details

Gene Information

• Locus tag: Plim_0295
• ID: 9136950
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: -
• Start bp: 374251
• End bp: 375015
• Gene Length: 765 bp
• Protein Length: 254 aa
• Translation table: 11
• GC content: 56%
• Product: metallopeptidase
• Protein accession: YP_003628345
• Protein GI: 296120567

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.516959
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTCAC ATCACCCTTG GATGCTCGCC GTTCTCATAT TTGTATCGGT AACCGCGTCG 
TCGATGCGAT GCTGTGTTGC CGACGAGCGG GCCGCGTTGC CCGCACCGAT TGCCGGATAT 
ACAACGCACG AGGTGGAGGG CTGGGTCGTG CGGGTCAGCG AGCGATTGTC ACAGGAACAA 
CCTGAGAAAA CAAAGCGAGC GTTGGAGTTG CTCGCCGAGC AACTTCGCAT CGTGATCCGC 
GTTTTGCCTG CGGAGCCGTT GGCGTTCGTT CGCACGGTGC CGATTTGGTT CTCGCCACCT 
TACGCCGGCG TTCGTCCGAA GGCTGAGTAT CATTCCGACA AAGAGTGGCT CGAAAAACAA 
GGTCGCTTGA AGGAGCTTTA TCAATGCGTC GAATTCACCA CCACGGCGAT TTTCGAGCGT 
GAGATTGAGC GGATGCCGGT TATCGTGCTG CATGAACTCG CCCACGCGTA CCACTACCAA 
GTGCTCGGGT TCGATAACGC CCTGATCAAA ACCGCGTTCG AGCGGGCACG TAATAGCGGC 
AGTTACGAAG TGGTGCTGCG GAAAGACGGA AATAAAGAAA AGGCCTACGC GCTCACCAAC 
CCGCAAGAGT ATTTTGCGGA ATCCACGGAA GCCTACTTTG GCCGCAATGA TTTCTTCCCC 
TTTGATCGCG CGGAACTGCA ACAACACGAC CCGGCGATGG TAAAGGTTTT GCAGGAAGTT 
TGGCAGGTCG AGCCGGATGC GAGTAACGCC GTTAAGGTCA AGTAA 

 

Protein sequence

MNSHHPWMLA VLIFVSVTAS SMRCCVADER AALPAPIAGY TTHEVEGWVV RVSERLSQEQ 
PEKTKRALEL LAEQLRIVIR VLPAEPLAFV RTVPIWFSPP YAGVRPKAEY HSDKEWLEKQ 
GRLKELYQCV EFTTTAIFER EIERMPVIVL HELAHAYHYQ VLGFDNALIK TAFERARNSG 
SYEVVLRKDG NKEKAYALTN PQEYFAESTE AYFGRNDFFP FDRAELQQHD PAMVKVLQEV 
WQVEPDASNA VKVK