Gene Plim_0259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0259 
Symbol 
ID9136914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp328842 
End bp330053 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content54% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003628310 
Protein GI296120532 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.279365 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGTTTC GTGCACAGTC TCCGTTTTGC AGCAGAACGA CTTCACAACC CGGCGATGCC 
ATCAAGCCTT CGATCTATCG AATTGGGCTC ACGCTTGCCG CTCTGTTGCT ATTCACCCCG
CTAACCTGGG CGAATGACAA AACCGCTTCT CTCGCCGATC TCGTTGCCAG AATCAAATCG
ATTGGCCTAA AGGGAGAAGG TTATCCAGCG GCTGTCGCTG CCCAGAAAGA ATTGTCATCG
CAAGGGCCAG AAGCTTTACT GCCGCTGCTC GATGCCATGG AGGGGGCTTC GCCACTGGCG
ATGAACTGGC TGGCCGGGGC TTTCGACACC ATTGCCGACC GCTCACTTCG AGCCGGTGCT
GTCAGCCAGG AATCGGGAGC CGGGATTCCT GCGGTCGCAT TTGAGAAAGT GCTGCTGGAT
CGCACGCGAT CGGCCACCCC AAGGCTTCTG GCTTTCGAGT GGCTCGTCAA GGTTGATCCT
GCTGCCCAGG ATCGACTGAT CCCCGGGATG CTTGACGATC CTTCCGCCGA TTTTCGTCGG
CTCGCAGTGG CCCGGCTCAT TGCTGCTGCC GATGCATCGA AAGATGATGC CGAGCGACTG
GATTTTTGGA AAAAGGGTTT ATCTGGTGCG ACGGATGAAG ATCAGGTCAA AGTGCTGGTC
GATCATTTGA AAGCAGCGGG TGTCACTGTC GATCTGGCCA GACATTTTGG CTATCTGCTG
GAGTGGAATC TGATCGGGCC TTTTGACAAC TCCGGAAGAG AAGGCTTTGC TAAAACCTAT
CCGCCTGAAG CCTCACGCGA TCTGGCAGTT CCTCTGCAAG GTCGAGAAGG GGAAGTCAAA
TGGGAGCCAT TCACTTCGAC CGACAAGATG TGCGAAGTCA ATCTCATTCC CATCTTCAAG
AACTATCGCG ATTCGCTCGC TTACGCAGTC ACTAACTACA AAGCTGCGAA GGCTGGCCCG
GCCCAGGTTC GCTTGACGAC TCCCAATGCC TGGAAAGTCT GGGTCAACGG GAAGCTGGTC
TTTGCACGAG ATGAATATCA TCGCGGATCC ATGTTCGACC AGTATGTGAT TCCCGTCACG
TTTCAGGAAG GTAACAATGA GATCCTGCTC AAGATCTGCC AGAATGAACA AACCGAAGAC
TGGGCGCAGA AGTGGTTTTT CAAAGTGCGG ATTACTGACA GTTCAGGTAA AGCCATCCTG
CCAGCCGAGT AA
 
Protein sequence
MVFRAQSPFC SRTTSQPGDA IKPSIYRIGL TLAALLLFTP LTWANDKTAS LADLVARIKS 
IGLKGEGYPA AVAAQKELSS QGPEALLPLL DAMEGASPLA MNWLAGAFDT IADRSLRAGA
VSQESGAGIP AVAFEKVLLD RTRSATPRLL AFEWLVKVDP AAQDRLIPGM LDDPSADFRR
LAVARLIAAA DASKDDAERL DFWKKGLSGA TDEDQVKVLV DHLKAAGVTV DLARHFGYLL
EWNLIGPFDN SGREGFAKTY PPEASRDLAV PLQGREGEVK WEPFTSTDKM CEVNLIPIFK
NYRDSLAYAV TNYKAAKAGP AQVRLTTPNA WKVWVNGKLV FARDEYHRGS MFDQYVIPVT
FQEGNNEILL KICQNEQTED WAQKWFFKVR ITDSSGKAIL PAE