Gene Plim_0213 details

Gene Information

• Locus tag: Plim_0213
• ID: 9136868
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 274281
• End bp: 276314
• Gene Length: 2034 bp
• Protein Length: 677 aa
• Translation table: 11
• GC content: 55%
• Product: DNA primase
• Protein accession: YP_003628264
• Protein GI: 296120486

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.387013
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGTTCTG CGGGCCAGCC AACAGTATCC TGGGATGAAA TCAAAGAGCA GGTGCGTGCT 
CGGACAGATA TTGTCCAGCT CATCGGCGAA ACGGTTTCTC TCCAACCTGC CCGAGGTGGT 
CGCACATTTC AGTGTCTTTG TCCTTTTCAC GATGACCACA ATCCTTCCAT GCAGGTGAAT 
CCGGAGCGGC AGACCTATCG CTGCTGGGTG TGCAATGAAG GGGGAGACTG CTTCTCGTAT 
GTGATGAAGC ACGACAATCT CAGTTTTCCG GAAGCGTTGA CTTTACTGGC TGAAAAAGCA 
GGGATTGAGC TGCCACGCCG CAGTCGAAAC GAAGCCGGCT TTGGGGAATC CTCAGGTCCG 
AAAAAGAGCG ATCTGTTTGA TGTTCTCGTG TGGGCTTCTC GCGAGTTCCA GCAATGTTTG 
AAGAGTTCTG CGCTCGGGGC ACCGGCCAGA GAATATCTGG CTTCGAGGCA GCTCAAACCC 
GAAATTGTCG AGCAGTTTGC GCTCGGCTAT CACCCGGACG ACTGGCACTG GCTGCAGGAG 
CGGGCTCGTG GCCGTTTCTC CGTTGATTCT CTCGCCGTTG TGCGCCTCGT GGGGGCTCGA 
GATAACGGCC CTGGCCATTA TGACTTTTTT GTCGACAGGC TGCTCTTCCC GATTTGTGAT 
GAACGCAGCC GACCAGTCGC GTTCGGCGGC CGGATTATTC CCGGTCGGCC CGCAAAGGAA 
GATGCTCCCA AATATTGGAA CAGCCCGGAG AGCCCGCTGT TTTCCAAAAG CCGTCTCTGT 
TATGGCCTCG ATCAGGCACG GGAGGCGATT CGCCGCACGG AGACTGTCGT GGTGACAGAA 
GGCTATATGG ATTGCATCAA AGCCCATCAA CATGGGCTGA AAAATGCCGT GGCGACATTA 
GGCACAGCAC TCACTGAAAA CCATGTCCAG GTATTGAAGC GTTTAGCCCG AAAATTTGTG 
TTGATTTATG ACGGTGATAC TGCCGGATTG AATGCTGCCG AACGTTCGTT GCCGCGATTT 
CTGGCTCAAG ACGTCGATTT ACGAATCTTG ACGCTTCCGG AAGGTCTCGA CCCTGACGAA 
TTTCTCGAAG CGAAGGGGTT GGCGGCTCTC GAACAGGCGA TTCAGGAAGC TCCCGAGGCA 
TTGGAGTTCA AGCTCCGCCG ATCAATTGAA AGGTTTGGCA CCGGAAGTGT GGATGCCCGT 
CAGCGTGTGA CGGATGAACT GCTGGAAACC ATGGCTCTTT CGCCAGGACT TGCGGGTTCT 
GTCCGTGAGA GAAATCTGCT TTCCAGGCTC ACTTCCCGGC TGGGATTGAG TGAATCGCTC 
CTGCAAAAGC GATTACGCGA CCTGCGCGTC GAACAGCGCT TCAAGAATGT TTCTCAGCCT 
CCCCGAAAAG TTGATCCAGC CGAATCATCG ATCATTGACG ACGAAAGACC GCTTCAGGAG 
CAGGTCAATT CGCTTCAGAG ATCGACCGCC GGAGACGATC TGCTGGAAAG CGAGTTCTTC 
CGCCTGTTGC TCCAATCACC GGATGATTTT CTATGGGTAA GCCAGCGAGT TGGTTCCGAC 
GACTTCCATC ACCCTGCATT CCGGCACCTG TGGTGTGTGT GCCTCGATGT GGTCGAACAT 
GGACTGTTGC CGTCGTTTGA ACTTTTGTTG GCACAAACCG AATCACCCGC CCTCAAAGGA 
CTTCTGGCGT GGCTGGGAGA AAGCCACCTG AGTGCGGCTG AACTGCTGAG CCTCCAGGAA 
TCGGCCGGAG TGATAGCGTC CACCAGCGAG CTGGAAAACT GGGCAGGTCA GCCAGGTTCA 
GCGGGTTCTG TAGCCGACCC AGGAGTTCGA CGGCACTTAC TCAGCCAGTT GACAGACCGA 
TTGGTGCTCC GCAGAGAACT GAACTTGCAT AAAGCACGCC GTATGGAACG TGGAGAGGCC 
GGGGCGAAAT TGAATCCGTC AGCGAAAGAT GTTTTGGCAC AAGCCATGCT TATTCATCGA 
AAACGAGCCG GGGGCATGCA GAACAATCCC CACGAATCAC CTTCCGGGGC GTAG 

 

Protein sequence

MSSAGQPTVS WDEIKEQVRA RTDIVQLIGE TVSLQPARGG RTFQCLCPFH DDHNPSMQVN 
PERQTYRCWV CNEGGDCFSY VMKHDNLSFP EALTLLAEKA GIELPRRSRN EAGFGESSGP 
KKSDLFDVLV WASREFQQCL KSSALGAPAR EYLASRQLKP EIVEQFALGY HPDDWHWLQE 
RARGRFSVDS LAVVRLVGAR DNGPGHYDFF VDRLLFPICD ERSRPVAFGG RIIPGRPAKE 
DAPKYWNSPE SPLFSKSRLC YGLDQAREAI RRTETVVVTE GYMDCIKAHQ HGLKNAVATL 
GTALTENHVQ VLKRLARKFV LIYDGDTAGL NAAERSLPRF LAQDVDLRIL TLPEGLDPDE 
FLEAKGLAAL EQAIQEAPEA LEFKLRRSIE RFGTGSVDAR QRVTDELLET MALSPGLAGS 
VRERNLLSRL TSRLGLSESL LQKRLRDLRV EQRFKNVSQP PRKVDPAESS IIDDERPLQE 
QVNSLQRSTA GDDLLESEFF RLLLQSPDDF LWVSQRVGSD DFHHPAFRHL WCVCLDVVEH 
GLLPSFELLL AQTESPALKG LLAWLGESHL SAAELLSLQE SAGVIASTSE LENWAGQPGS 
AGSVADPGVR RHLLSQLTDR LVLRRELNLH KARRMERGEA GAKLNPSAKD VLAQAMLIHR 
KRAGGMQNNP HESPSGA