Gene Plim_0149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0149 
Symbol 
ID9136803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp200966 
End bp201982 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content53% 
IMG OID 
ProductTrans-hexaprenyltranstransferase 
Protein accessionYP_003628200 
Protein GI296120422 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATGT CCAAGCCTCC TGTGCTGGAT CAACCCATCC AGGGAGGAAG TCTGCTGGCA 
GCTTTGGACA GTTTGCTGGC TGACGATCTT GCTGCCGTCG AGCGCATTCT CTGGAACGAA
CTCGAAAGCG ATCAACCCTG CGTGAAGGAT ATTCTTCAGC ATGCAACGCG TTTTCGTGGC
AAGCGATTAC GACCAATTCT GGTTCTGCTC TCTGCCAGGG CTTGCGGCGA AGTGAATGAA
ACCCATCGCC TGCTGGCGGC TGTCGTTGAG ATGATCCACA TCGCCACGTT AGTTCACGAT
GACGTCCTCG ACGAAGCTTC GACACGCCGA CATGTCGCAA CAGTTAATGC GCGGTGGAAC
AACGAAACGA GTGTGCTGTT TGGCGATTAT CTTTTCACAC ATGCGTTCCA TCTGGCGAGT
GAACTTCCGA CTTCACACGC CTGTAGGATC ATCGGGCGAG CAACGAATAA GGTCTGTGAA
GGAGAACTCA CCCAGATCCA TGAGCGTGGT AATCTCGATT TGAATGAAGA GACGTACTTC
AAAATCATCA ATGGGAAAAC GGCAGAACTG ACGGCTGTCA GTGCCTATCT GGGGGCTCAT
TACGCCGACC AGCCCGCGGA AGTCGTGAAT GCTGTTGAAG CCTATGGTCG GAAGCTGGGT
CTAGCATTTC AGATTGCCGA CGATCTGCTC GACATTCTCG GAGTCGAAAA GAAGACCGGC
AAAACGTTGG GATCAGACCT CAAAAAACAG AAGTTGACGC TGCCCATCAT TCGTTTGCTG
GCAACCGCCA CATCTGCCGA TGCGACGATT ATTCGTGAAC TGCTTGCCCA TCCAGAAGAC
GATACAGCCG GGCAATTGCG GGAATATCTG CACAAGAGCG ATGCTCTCGA ATACACCTCA
CAAACGGCAC ACAAGCTGGT GGAAGAGGCT TGTGAGCATT TGAACGTGTT GCCTGAGAGT
CAGGCACGCC ACTGGCTCTG CGAGATCGCA CGCTTCTCAG TGGAAAGATC GTTTTAA
 
Protein sequence
MTMSKPPVLD QPIQGGSLLA ALDSLLADDL AAVERILWNE LESDQPCVKD ILQHATRFRG 
KRLRPILVLL SARACGEVNE THRLLAAVVE MIHIATLVHD DVLDEASTRR HVATVNARWN
NETSVLFGDY LFTHAFHLAS ELPTSHACRI IGRATNKVCE GELTQIHERG NLDLNEETYF
KIINGKTAEL TAVSAYLGAH YADQPAEVVN AVEAYGRKLG LAFQIADDLL DILGVEKKTG
KTLGSDLKKQ KLTLPIIRLL ATATSADATI IRELLAHPED DTAGQLREYL HKSDALEYTS
QTAHKLVEEA CEHLNVLPES QARHWLCEIA RFSVERSF