| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0127 |
|---|
| Symbol | |
|---|
| ID | 9136781 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 173405 |
|---|
| End bp | 174763 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF214 |
|---|
| Protein accession | YP_003628178 |
|---|
| Protein GI | 296120400 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTTTA ATACGATCCG CGCTGTTCGT CTGGCACTTA AGAGCCTGCT GCTGCATAAG
CTGCGGTCGG GCCTGACGAT GCTCGGTATT GTCTTTGGGG TCTTTTCTGT GATTGCCATG
CTCGCCATTG GCGAAGGGGC CAGTGCTCAG GCGCAGGCTC AGGTGCGTCA ACTGGGGGCG
ACAAACATCA TTGTGGTGAG CGTCAAGCCC CCCGCCGATT CTTCGTCGAA CTCATCGAGA
TCGTCAGGTC GCGGTCCTTC AGTATTAGCC TACGGGCTTT TGCGAGCCGA CTATCGACTG
CTGTCGGAGA CGATTCCCAC AATCACCAGC ACCATTGCGA TTCGGGAAAT CCAATCCGAA
GTACGTTATC TGCAGAATAC GATCAACGCC CGCGTGGTCG CGACGACCAC AGGCTACAAA
GATATGAATC ATCTGGAGAT GGCTGAAGGT CGCTTTCTCA CCGATCAGGA TGAACGCGAG
ATGGCCAATG TCGCTGTCAT CGGGAGTGAA GTCGCCGCCA GACTCTTCCC CTATGAAAGC
CCCGTTGGCA AAACTATTCT GATGCGTTCG TTTCGGTTCA CCGTCGTGGG CGTTACGCGC
TCACGAACAG CTTCCGCTGC GATCGGTGGC AGTATGTCCG GGCAGGAATT CAACAAAGAC
GTCTACATCC CGCTCAAGAC ATTCCAGACA CGAATTGGTG ACCGCGTGAT TACGGCACTC
AGTGGTTCAT TCTCTGCTGA AGAAGTGCAA CTCAACCAGA TCACGCTGCA GGTGGCAGAA
ACACAGGATG TCGTCCGCAC CGCCGACGTC GTGCGGGAAT CACTCATGCG CAATCATCGT
GGCAAAAACG ACTACGATGT GATTGTCCCT CTCGAACTTC TGAAGCAGGC CGAGCAGATC
AAGCAGATCT TCAACATTGT GCTGGGCTCG ATTGCCGCCA TCAGTCTGGT CGTGGGCGGA
ATTGGGATCA TGAATATCAT GCTCGCCACC GTCACCGAGC GAACACGCGA AATTGGCATC
CGGCGGGCAC TGGGCGCCAG GCAATCCGAT ATCATCAGCC AGTTCCTGAC AGAGACGATA
GTTCTTTCCG GGACTGGTGG GTTATTGGGT GTCGGCCTGG GCCTGTGCAC ACCACTGGCT
TTTATGGGGA TCCAGTGGAT TGTGGAAAAT GCGGTGCTTT CGGGAAGTTC AGGAACGTCC
GAAATCAGCC AGCTCTTTGG AAATATGCGG CCACAGATCG CTTTCTGGAG TCTGCCGATT
GCCTTTGGAA TCTCCGTCGG GATTGGTGTA ATCTTCGGCA TCTACCCCGC ACGTTCGGCA
GCACGCATGG ATCCGATCGA AGCACTCCGG CACGAATAG
|
|---|
| Protein sequence | MFFNTIRAVR LALKSLLLHK LRSGLTMLGI VFGVFSVIAM LAIGEGASAQ AQAQVRQLGA
TNIIVVSVKP PADSSSNSSR SSGRGPSVLA YGLLRADYRL LSETIPTITS TIAIREIQSE
VRYLQNTINA RVVATTTGYK DMNHLEMAEG RFLTDQDERE MANVAVIGSE VAARLFPYES
PVGKTILMRS FRFTVVGVTR SRTASAAIGG SMSGQEFNKD VYIPLKTFQT RIGDRVITAL
SGSFSAEEVQ LNQITLQVAE TQDVVRTADV VRESLMRNHR GKNDYDVIVP LELLKQAEQI
KQIFNIVLGS IAAISLVVGG IGIMNIMLAT VTERTREIGI RRALGARQSD IISQFLTETI
VLSGTGGLLG VGLGLCTPLA FMGIQWIVEN AVLSGSSGTS EISQLFGNMR PQIAFWSLPI
AFGISVGIGV IFGIYPARSA ARMDPIEALR HE
|
|---|
| |