| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0105 |
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| Symbol | |
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| ID | 9136759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 145484 |
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| End bp | 147391 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | DNA topoisomerase (ATP-hydrolyzing) |
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| Protein accession | YP_003628157 |
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| Protein GI | 296120379 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGACAG CCTATACCGC ATCAGATATT GAAGTGATCG AAGGTCTGGA GGCCGTGCGC
CGCCGACCCA GCATGTATAT CGGCGGTGTC GATGCCCGCG GGCTGCATCA CCTCTTATGG
GAAATCGTCG ATAACAGTGT CGATGAATGC CTGGCGGGTG AAGCGACTGA GATCACGGTC
ACTCTGCATA AAGATGGCGA GTCCTGTTCC GTGAGTGATA ACGGTCGCGG CATTCCTGTC
GATCTACATC CCAAAACGAA AAAGTCGGCG CTCGAAACGA TCCTCACCAC GCTCCACTCG
GGTGGGAAAT TCAGCAAAAA TGCCTATGCA CGCAGCGGTG GTCTGCATGG TGTGGGCTCA
TCGGTGGTGA ATGCCCTTTC GGAAGAAATG GTCGCCACTA TCCATCGCGA TGGCTTCGAA
TGGCAGCAGC GCTTCAAACG CGGTAAACCC ACGACTGCTC TCAAGCAGGT ACGTCCTTTT
CGAGGTCGCG GAACCGATGT TTTCTTCCGG CCCGATAAAG AGATCTTCGC ACGAACTGTC
TTCAGCATCG AGACGATCAA GGCTCATCTG GAAGACATTT CGTACATTCA TGCCGGGCTC
AAGATTACAT TGATCGATGA AGCCAAGAAA GAAACTGTCG TCCTGCATCA TCCCGATGGA
CTGCAGACTT ACCTCGCCCG CCTGATGACC GAAGGGCAGC GTAAACCTGT CCATGAAAAT
CTGTTTCAGT TCTCGAAAGA TGATGGCAGT TATAAAGTCG AAGCGGTCTT TCGCTGGTCA
GAATCGACGG ATGAGCACCT GCGAAGTTAT GTGAACGGCA TCCGCACCCA CGCTGGCGGC
ACTCACGAAA GCGGACTTAA AAGTGCCATC GGCAAAGCCG TTCGCAATTA CATGGAAGTG
CACGATATCA AGGTCAAAGG TCTCACGATC CAGAACGATG ACATTCGCGA AGGAATTGTG
GGGCTGCTTT CGGTCTTTCT GGCAGAGCCC ATGTTCCAGG GCCAGACCAA AGAAAAACTC
AATAACCCTG AGATGTCGAG TGTCGTCGAA GGGCAGATCC GGCCTGCGCT CGAGAACTGG
TTGTCGAGTA ATAAGACAAC GGCCGATGCG ATCGTCGGGC GGATCGTGCT GGCCGCGAGA
GCTCGGGCTG CCAGTCGTGA GGCGGCCAGT GAAGTCCGCC GGAAATCGCC CGCGGCCCGC
AGGTTGAGTC TGCCTGGTAA ACTCCTCGAT TGTCGATCCA CCAATGCGGA TGAATCCGAG
CTGTTCATCG TCGAAGGTCT TTCGGCTGGT GGAACTGCCG GTATGGGACG CGACAGCCGG
ACTCAGGCCG TCCTGCCACT TCGAGGCAAG GTGCTCAACA CCCAGAACAT GACGACGGCA
AAGATCCTCG ATAATCAGGA AATCAAGGAT CTGGTGGAGA CATTAGGGAC AGGGATCGGG
CCAAACTTTG ATCTGCATCG CTTGCGCTAC GGCAAGATCA TTCTGATGAT GGATGCCGAT
TCGGACGGGT ATCACATCAG TACGCTGTTG CTGACCTTCT TCTTTGGGCA CATGCCCGTG
TTGATTACAC AGGGCAAGTT GTTTCTGGCA CAGCCCCCGT TGTATCGCAT CCAGTCAGGC
AACCAAATCT TCTATGCCCG CGACGATCTG CATAAAGAAG AGTTTCTCGA TTCACTTCCA
GCAAATCGAA ACCCGGATGT GCTGCGATTT AAAGGTCTGG GTGAGATGAC TCCTTCCCAG
TTGAAAGAGA CGACACTCGA CCCGAAGACG CGCATCCTGC TCCGTATCGA TATCGACAAT
CAGCTCGAAG CCGACCAGAC GTTTGAAAAA TTGCTGGGGA AGGAACCTGC CGAGCGCTAC
AAACTGATCA TGGAACAGGC GAATCAGGTG GATGATCTGG ATGTGTGA
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| Protein sequence | MATAYTASDI EVIEGLEAVR RRPSMYIGGV DARGLHHLLW EIVDNSVDEC LAGEATEITV
TLHKDGESCS VSDNGRGIPV DLHPKTKKSA LETILTTLHS GGKFSKNAYA RSGGLHGVGS
SVVNALSEEM VATIHRDGFE WQQRFKRGKP TTALKQVRPF RGRGTDVFFR PDKEIFARTV
FSIETIKAHL EDISYIHAGL KITLIDEAKK ETVVLHHPDG LQTYLARLMT EGQRKPVHEN
LFQFSKDDGS YKVEAVFRWS ESTDEHLRSY VNGIRTHAGG THESGLKSAI GKAVRNYMEV
HDIKVKGLTI QNDDIREGIV GLLSVFLAEP MFQGQTKEKL NNPEMSSVVE GQIRPALENW
LSSNKTTADA IVGRIVLAAR ARAASREAAS EVRRKSPAAR RLSLPGKLLD CRSTNADESE
LFIVEGLSAG GTAGMGRDSR TQAVLPLRGK VLNTQNMTTA KILDNQEIKD LVETLGTGIG
PNFDLHRLRY GKIILMMDAD SDGYHISTLL LTFFFGHMPV LITQGKLFLA QPPLYRIQSG
NQIFYARDDL HKEEFLDSLP ANRNPDVLRF KGLGEMTPSQ LKETTLDPKT RILLRIDIDN
QLEADQTFEK LLGKEPAERY KLIMEQANQV DDLDV
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