Gene Plim_0043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0043 
Symbol 
ID9136696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp57212 
End bp58414 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content54% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003628095 
Protein GI296120317 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.303817 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGTCG AAAAGCTCAG CAAGACATGG TTTAACCTCG TCCATGGCCG AAATCTGGTC 
TACAACCAGT GCTGGGAAGA CCCTCGCTTA GACCGGGTAG CCCTCGAACT GACTTCAAAT
GACCGTGTGG TGGTCATCAC TTCCGCCGGT TGCAACGCTT TGGATTATGC ACTGGCCGGT
GCAGGCCACG TCCATGCGGT CGATATGAAT CTGCGGCAGA ATGCACTGCT GGAACTCAAG
CAGGCTGGCA TTCGCAAGCT CGATTACGAA GACTTCTTTC AAATTTTTGG TAATGGTGGT
CATCCCCAGT GGAGCACCAT TTACACACAA AAGCTGCGAC CGGAACTGAG TGATACCACC
CGCAAGTTCT GGGATCGCAA AAAGGCTTTC TTCACGGGCG ATACCCGCCG CAAGTCGTTC
TATTTTCACT GCACTTCGGG CACATTTGCC TACATTATCA ATGTTTACAT CGACCGGATC
GCCAAGCTGC GTGACGGGGT CAATGCCATC CTGGCAGCCA GCAGCCTCGA ACAGCAACGC
GATATTTTCA AGCAGTACAA GCTGGCCGAA TCACTCTGGC GGCCCTTTAT CCGCTGGGCC
ATGCGGCGGG ATATGACTCT GGCACTGCTG GGGGTTCCCA GAGCTCAGCG TAAGCAGATT
GATGAGCAGT ATCCCGGTGG GATTCTGCAG TTCGTGATGG ATCGCGTCGA AGCCGTCTTC
ACCAAGCTGC CGATCAAGGA TAACTACTTC TGGCGTGTTT ACCTCACAGG CCAGTACACG
CCCGAATGCT GCCCCGAGTA TTTGAAGCCC GAAGGCTTCG CACAGCTCAA GGCTGGGGCC
GTCGATCGAG TGAGCACACA TACCAACCAC ATTCTCGGGT TCCTGCAGGA AACGCCGCAT
CAGATTTCGC GGTTCATTCT GCTCGATCAC ATGGATTGGC TTTCCAAAGA TCCAGCCATG
GCCATCCTCA CTCAGGAATG GCAGGGGATC ATGGACAAAG CCGCCCCCAA TGCCCGCGTA
TTGTGGCGTT CAGCTGGCCT CAATGGTGAG TTCGTAAATC CCATTCAGGT TACTGTGAAC
GGCCAGAAGA AAACTCTGGG TGAAGCCCTC GAGTACAATC GTCCGCTGGC CGAAGAACTC
CATGCGAAAG ACCGCGTGCA TACTTACGGC AGCTTCTGCA TTGCGAACAT CAAGAACACA
TAA
 
Protein sequence
MVVEKLSKTW FNLVHGRNLV YNQCWEDPRL DRVALELTSN DRVVVITSAG CNALDYALAG 
AGHVHAVDMN LRQNALLELK QAGIRKLDYE DFFQIFGNGG HPQWSTIYTQ KLRPELSDTT
RKFWDRKKAF FTGDTRRKSF YFHCTSGTFA YIINVYIDRI AKLRDGVNAI LAASSLEQQR
DIFKQYKLAE SLWRPFIRWA MRRDMTLALL GVPRAQRKQI DEQYPGGILQ FVMDRVEAVF
TKLPIKDNYF WRVYLTGQYT PECCPEYLKP EGFAQLKAGA VDRVSTHTNH ILGFLQETPH
QISRFILLDH MDWLSKDPAM AILTQEWQGI MDKAAPNARV LWRSAGLNGE FVNPIQVTVN
GQKKTLGEAL EYNRPLAEEL HAKDRVHTYG SFCIANIKNT