| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3571 |
|---|
| Symbol | |
|---|
| ID | 5456373 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 3819195 |
|---|
| End bp | 3820010 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640879155 |
|---|
| Product | dihydrodipicolinate reductase |
|---|
| Protein accession | YP_001414826 |
|---|
| Protein GI | 154254002 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0289] Dihydrodipicolinate reductase |
|---|
| TIGRFAM ID | [TIGR00036] dihydrodipicolinate reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 85 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCTG ACATCAAAAT CGTCGTGACG GGTGCTGCCG GCCGGATGGG CCGGACGCTG
ATCCGGCTTA TCCACGAAAC CGAGGGGCTG TCGCTTGCGG GCGGGCTCGA AGGCGAAGGC
TCGCCTTATC TCGGCACCGA CCTCGGCACG CTGGCGGGTC TCGCGCAGCC GACAGGGCTC
GCGGCCACTG CCGATGCGTT GACGCTCATC AAGGATGCCG ATGCGCTGAT CGATTTTTCG
GTACCTGCCG CGACGCTCGA ATTCGCCGCA TTGGCGGCGC AGGCGCGGAT CGTGCACGTC
ATCGGCACGA CGGGCTTTGA GGTGGTGGAC GAAGAAAAGA TCAAGGCGGC GGCACGGCAC
GCAACGATCG TGAAGGCCGG CAATATGAGC CTCGGCGTCA ACCTGCTCGC CGCGCTGGTG
CGCCAGGCCG CCAAGGCGCT TGACGGCCAG TGGGACATCG AGATCGTGGA AATGCACCAT
CGCCACAAGG TGGACGCCCC CTCCGGCACC GCACTTCTGC TCGGCGAAGC GGCGGCGGAG
GGACGCGGCG TCGCCCTCGA AGATGTATCG GCGCGGGGAC GCGACGGGAT TACCGGCGCG
CGGAAAGCGG GCGATATCGG TTTTGCGAGC CTGCGCGGCG GCTCGGTTGT TGGCGACCAC
ACAGTGGTCT TCGCGACAGA GCATGAGCGC ATCACGCTTG GCCATATCGC CGAAGACCGG
TCGATCTTCG CGCGCGGCGC GCTCAAGGCC GCGCGCTGGG GCCAGGGCAA GGGCCCCGGC
CTTTTCAGCA TGGCCGATGT TCTCGGCATC GAATAA
|
|---|
| Protein sequence | MTADIKIVVT GAAGRMGRTL IRLIHETEGL SLAGGLEGEG SPYLGTDLGT LAGLAQPTGL
AATADALTLI KDADALIDFS VPAATLEFAA LAAQARIVHV IGTTGFEVVD EEKIKAAARH
ATIVKAGNMS LGVNLLAALV RQAAKALDGQ WDIEIVEMHH RHKVDAPSGT ALLLGEAAAE
GRGVALEDVS ARGRDGITGA RKAGDIGFAS LRGGSVVGDH TVVFATEHER ITLGHIAEDR
SIFARGALKA ARWGQGKGPG LFSMADVLGI E
|
|---|
| |