Gene Plav_3554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3554 
Symbol 
ID5454055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3796620 
End bp3797117 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content59% 
IMG OID640879138 
Producthypothetical protein 
Protein accessionYP_001414809 
Protein GI154253985 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCATG CGTTCGCACT ATCGGCAGAG GTGGCCAAGC TCCCTGCGCT TGAACGGCTC 
ATCGAGGAAA TCAACGATCT CCAGAGCAAG CTGATCCTGC TCGTCGGCAG CAGCGGCAAA
ACGCGCCTTC TGCGCGCTTT GGCGCGCCGG TTGAACGCCA AGCCTCTCAA TGTCGGCGTG
ACGCTCGGAC GTCGCTTAGC GGTCACGCCC GTCTCTGATC GCGGTTTCTC GACGAACGAA
CTGCTCCGCG AAATCACTGA TGGCGTGAGC GGTGACGCTC CGCTGCTGCT CGACAACCTC
GAAGTGCTCT TTGAGCCTAG TCTGAAGGTC AATCCACTCA ACGTCATCAA ACTGCTGGCG
CACTCACGTC CGGTCATCGC GGTATGGCCA GGTGAAATAC ACAACGATCG GCTGATTTAC
ACCGGCATGG GACATCCCGA GCACCGCGAC TACAGCCGCG ACGGCGTCGT CGTCTTTGAA
ACGGCGCAAC GTCAATAA
 
Protein sequence
MTHAFALSAE VAKLPALERL IEEINDLQSK LILLVGSSGK TRLLRALARR LNAKPLNVGV 
TLGRRLAVTP VSDRGFSTNE LLREITDGVS GDAPLLLDNL EVLFEPSLKV NPLNVIKLLA
HSRPVIAVWP GEIHNDRLIY TGMGHPEHRD YSRDGVVVFE TAQRQ