Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3472 |
Symbol | |
ID | 5453605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 3717260 |
End bp | 3717913 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640879057 |
Product | hypothetical protein |
Protein accession | YP_001414728 |
Protein GI | 154253904 |
COG category | [S] Function unknown |
COG ID | [COG2442] Uncharacterized conserved protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 0.84444 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGCAG TCGCGGAAAT GCTGAAGGTC AGCGAGGTCG CCGTTGTCTC GCGCGTGAGC CTGCGCGACG TCAATCGTGC TCTCGACGAA CACATCCTGC CGGACGCCTT CGTCTCGTTC GACAATGGCC GTTACGTCCT GGCCGGCGCC TGTTCGCTCA TCACCTTCTA TTTCGCGAGC GCCCGGCGCC TGACCTCGGA AGAGCGCCTG TCGGCCATCA GGACCGCAGA GCCTCGGCTT GCGCGGTCCC GCGCCCTGCC TTGGGCTGCG CTGTTGCGTG AGGATTGGAC CGTCCGCGAC GATTTCCTGA CCATCGACCT GCTGCCCTTC ATGAAGGGCG CGAGCGAGCG GCTGGACGAT CTCGCCACCG CGCGGGAGAT GGTCACGACC TCACCCGACA TTCTCGGCGG CACACCCGTC ATTCGGGGCA CCCGTGTTCC GGTCTATGAT GTCGCGGCAT CCGTAGCCGC CGGCCATTCG ACGGAGCGCA TCCTCGCGAC CTGGCCCAGC CTAGATACCG AAAAAGTCAG GCTTGCCACA ATCTACGCGG AGGCAAACCC GCTGCGCGGT CGCCCACGCG CTCCCGCCGA TCTTTGCGAA GGCTCGGTCA TTATCACGGA TCGCCGCATT CCTCGAGCCA GGAAGGCGGG ATGA
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Protein sequence | MPAVAEMLKV SEVAVVSRVS LRDVNRALDE HILPDAFVSF DNGRYVLAGA CSLITFYFAS ARRLTSEERL SAIRTAEPRL ARSRALPWAA LLREDWTVRD DFLTIDLLPF MKGASERLDD LATAREMVTT SPDILGGTPV IRGTRVPVYD VAASVAAGHS TERILATWPS LDTEKVRLAT IYAEANPLRG RPRAPADLCE GSVIITDRRI PRARKAG
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