Gene Plav_3433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3433 
Symbol 
ID5456568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3669481 
End bp3669939 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content60% 
IMG OID640879022 
Producthypothetical protein 
Protein accessionYP_001414693 
Protein GI154253869 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.703957 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.315896 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGGC ATGGCTGGAC GCTGCTATTC CATGACTGCG TGATCGAGCA GTTGCAGAAG 
TTGCATGCAG CCGCCCGGCG CGCGCAGGAG AACGATCCGA ATGGCTTCGA GTCCAACGCC
AACGTCAAGC TCTTCCGGGC CTTGAGTCAG TTGATGCTGG ATGTGGTGCC GAGTGATCCG
GCGCGCGACG AATACCGCCA GGGCAATACC TTGGGGCCGG CCCACCGCCA CTGGCGACGG
GCCAAGATCG GAAGGCGGTT CCGGCTGTTC TTCCGGTACG ACTCCAAGGC GAAGATCATC
GTTTACGCCT GGGTCAACGA TGAGCAGACA TTGCGGTCGT CGGGCAGCAA GTCAGACCCC
TACGCCGTTT TTGAGAAGAT GTTGGGGCGG GGAAATCCGC CGGACGACTG GAACGCATTG
GTACTGGCAA GCAAGCAGGA TTGGAGCAAA CTGAAGTAG
 
Protein sequence
MQRHGWTLLF HDCVIEQLQK LHAAARRAQE NDPNGFESNA NVKLFRALSQ LMLDVVPSDP 
ARDEYRQGNT LGPAHRHWRR AKIGRRFRLF FRYDSKAKII VYAWVNDEQT LRSSGSKSDP
YAVFEKMLGR GNPPDDWNAL VLASKQDWSK LK