Gene Plav_3419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3419 
Symbol 
ID5456282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3656064 
End bp3656474 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content67% 
IMG OID640879008 
Producthypothetical protein 
Protein accessionYP_001414679 
Protein GI154253855 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.399009 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.0716917 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGC AGCAGCACGT CCGTGCGGAC GGGACGGTCA CGTTCCTTCC ACACCGGCTC 
AACCGCCATC CCATTGTGGT GCGCGGCCTT ACCGCAGACG AACTGTGGAT CTGCTGCGGC
TTGTCTGGCG GCGCCGGCTT GCTGATCGGC GCGCCGCTGT CCTGGGTGTC CCGCACCATT
GCGCTGGCGC CCACATTCAT CGTGCTGGGC GTGGCGTTTG GTGTGTTCGT GGGCGGCGGT
ATCCTACGTC GGCTCAAGCG CGGCCGTCCC GACACCTGGC TGTACCGGCA GTTGCAGTGG
CGCATCGCCA CGAAGCATCC GTTGGCTGCC GGCTGGGTGG GCGGCCACGT GCTGATCTCG
CGTTCCGGCT TCTGGACCAC CCGAAGGTCT GTTGCAAGGG GGACGCGATG A
 
Protein sequence
MSEQQHVRAD GTVTFLPHRL NRHPIVVRGL TADELWICCG LSGGAGLLIG APLSWVSRTI 
ALAPTFIVLG VAFGVFVGGG ILRRLKRGRP DTWLYRQLQW RIATKHPLAA GWVGGHVLIS
RSGFWTTRRS VARGTR