| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3408 |
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| Symbol | |
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| ID | 5455240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3646900 |
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| End bp | 3648684 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640878997 |
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| Product | hypothetical protein |
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| Protein accession | YP_001414668 |
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| Protein GI | 154253844 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.043782 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.188523 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGGTTT CTCGGGTCAG GTTGATCAAT TTCGCCAATT TCTCGGATGT TGATGTCGAG
ACGGGGGAAA GCATCGTCAT CGTTGGAGAG AACAAGGTTG GCAAGAGCAA TTTCATTCGC
GGCCTGCAGT TGATCCTTGA TCCAGGTTTG TCTGAACGCG ATCGACAACT GGGGCTTGAG
TATTTCTGGG ACGGACTTGG CGAAGACAAG GTTGGTGCGA CCATTGAGGT CTCTGTGGAT
CTAACGGACT TCACAAACGA TCCCCGGTTG ATGGCCCACC TCAACGACTG CGTGATTAAT
CCTGGCCCTC CTATGGTGGC CCGACTCACC TATCGCTTCC AGCCTAAAGC GGGACTGGGG
CGCGCCCCAG AATCGTTGAA AGACTATGAG TACATAATCT TCGGTGGTAA CGATCCCGAT
ATGCTCATTG GTGGCGCACT TCGCCGAATG TTGCCAATAG ATGTTCAGGT AGCGCTGCGC
GACGCTGAAA AGGACCTTGC GAGCTGGCGT AATTCGCCAT TGAGACCGCT CATTGAGGAT
CTCGCAGCAT CCCTGGATGA TGACGCCCGC GAGGAGATCC AGAATCAGGT CGATGAAGCA
CAGCGAGAGC TGGCCGGTCA TGAGGAAGTG GTCGCGACAG CGGAACGAAT CAGCGAACGG
TTGATCGCCA TCGCCGGTGG GCAGCATGCC GTCCCGGTAT CGCTCGGACT TGCACCTACG
CGAGTCGATG CGTTGCTGCG TAGCCTTCGG CTGCTCATCG ACAACGGTGT TCGCGGTGTC
GGCGATGCCA GCCTAGGAAC GGCAAATCTG ATCTTCCTGG CCTTGAAGAG CCTCGAACTC
GACCGCTTCG TCTCCGAGGG GGAGCGCGAC CACACATTCT TCGTCGTCGA GGAGCCCGAA
GCGCACCTGC ATCCGCATGT CCAGCGTCTT GTCTATCGCT ACTTCCTCGG CACAAGAGCT
GAAGATGAGG ACGAAGCCCC TCCGCTGACG ACAATTCTCA CTACTCACTC ACCGCATATC
GCAAGCGTTG CACCGATTAG GTCCATCGTT CTCCTGCGCC ATAACGCAGC GGACGGAAAA
ACCATCGCGG TTTCAACCGC AAACGCACCT TTCACACAGA GGGATGAAGA CGACCTCCAG
CGCTACATCG ACGTCACTCG CGGAGAAATA TTCTTTTCCC GGGGAGTGAT TCTGGTTGAA
GGGGACGCTG AGCGCTTCAT CATCCCCGCG TTCGCCGAGG CCCTCGGGAT TCCTTTCGAC
ATACTTGGAA TCACTGTGTG CTCGGTCGGG GGGACGAACT TCACTCCTTA TGTGAAGCTT
TTGGGCCCTA AAGGGCTAAA TATTCCACAT GTAATTTTGA CAGATCGCGA CCCGGTCAAT
GGCAAACCTC CACTGGCCCA CAGGCGATTA ATTAATCTCT TGAACGAGGT CGATGAAGAA
TATGGCTACG ATGACCTGGA TATAGATGAT GTGCTCAAGT ACGCCGCGGA GTTTGGATAC
TTCGTCAACG AGAGCACGCT GGAATCCGAC CTATTCGCTG CCGGAATGGC CGAGGCGATG
AAGGCGGTAA TCGAGCAGGA GTTGCCGCTG AGGCAAGTCA CCCGGGACGC ATTACAAGAG
TGGGTGGCTG ATCCGGATCA GGTCGATGAA GACCGGCTGC TGAAGTTGAT TGAACGGATT
GGCAAGGGGA GATTTGCACA GGCACTTGCG CCGTCGGTGT CTGAGGGCGT TTGCCCGGCC
TACATTCGCT CTGCGCTGGA GCATATCCGC GATGCCGTCG CGTAA
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| Protein sequence | MRVSRVRLIN FANFSDVDVE TGESIVIVGE NKVGKSNFIR GLQLILDPGL SERDRQLGLE
YFWDGLGEDK VGATIEVSVD LTDFTNDPRL MAHLNDCVIN PGPPMVARLT YRFQPKAGLG
RAPESLKDYE YIIFGGNDPD MLIGGALRRM LPIDVQVALR DAEKDLASWR NSPLRPLIED
LAASLDDDAR EEIQNQVDEA QRELAGHEEV VATAERISER LIAIAGGQHA VPVSLGLAPT
RVDALLRSLR LLIDNGVRGV GDASLGTANL IFLALKSLEL DRFVSEGERD HTFFVVEEPE
AHLHPHVQRL VYRYFLGTRA EDEDEAPPLT TILTTHSPHI ASVAPIRSIV LLRHNAADGK
TIAVSTANAP FTQRDEDDLQ RYIDVTRGEI FFSRGVILVE GDAERFIIPA FAEALGIPFD
ILGITVCSVG GTNFTPYVKL LGPKGLNIPH VILTDRDPVN GKPPLAHRRL INLLNEVDEE
YGYDDLDIDD VLKYAAEFGY FVNESTLESD LFAAGMAEAM KAVIEQELPL RQVTRDALQE
WVADPDQVDE DRLLKLIERI GKGRFAQALA PSVSEGVCPA YIRSALEHIR DAVA
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