| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3329 |
|---|
| Symbol | |
|---|
| ID | 5454484 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 3565121 |
|---|
| End bp | 3566218 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640878919 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001414590 |
|---|
| Protein GI | 154253766 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.63767 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 0.12265 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATTC AGCGGCAGGC GATCATCTGG GCGCTTTTCA TCGCGCTTTT CGTCGCGGGC
CTGTGGCTGC TCAAGGGCAT ACTGTTGCCT TTCGTGGCGG GCATGGCGAT CGCCTATTTC
CTGGACCCGC TGGCCGATAA GCTTGAAAGC TATGGACTGT CGCGACTGGC GGCAACGGGG
ATGATCACGA TCGTCTTCCT GCTCCTTGCT ATCGTGATGC TCATCGTACT CGTGCCGGTT
CTCTACAATC AGCTGATCGC GCTTGTCGAA ATCTTTCCGG CGCTGATGCG CCGGGGGCAG
GAATGGCTGC TGACGATTGG TGATGGCCGT CTGGGACGGC TTCTCGGGGT CGAGGGACAG
GATGTCGAGC AGGCGATCAG GCAGAGCCTC GGCGGCTCGC TTGATTGGCT GGTGAATATC
CTCACTTCGG TGGGATCGCA GGGTCTGCAG ATAGTCGCAC TTCTCTCGCT GATCGTCGTG
ACGCCGGTCG TTGCATTTTA TCTGCTGCTC GATTGGGACC GTATGGTGGA GCGCGTCGAC
GCATTGCTGC CGCGGGACCA TGCCGAGACA ATCCGGCGTC TTGCACGCGA GATCAACGAG
GTGCTGGCAG GCTTCATCCG CGGCCAGGTG ATTGTCTGCC TGGTGCTCGG TACGATTTAT
GCGGTAGGCC TGACGCTGGT CGGCCTTCGT TTCGGGCTTA TTGTCGGCAT TGTTGCCGGC
ATTATCAGCT TCATTCCCTA TCTCGGGACC ATTCTCGGTT TCGTGGTCGG GCTGGCGCTG
GCCCTATTCC AGTTCGGCAC CGATTTCGTG CAGGTCGGCA TGGTGATTGG TGTCTTCGCC
ATCGGCCAGT TCATCGAAGG GAATTTTCTG TCGCCGAAGC TCGTTGGGGA CCGGGTGAAG
CTTCATCCGG TATGGGTGAT GTTCGCGATC TTTGCCTTTG CCGCCCTCTT CGGCTTCGTC
GGGGCGTTGC TTGCGCTGCC GATTGCCGCT GCCCTCGGTG TGCTCGCGCG TTTCGGCGTC
GCGCAATACC GCAAGAGCCA GCTCTATCTC GGAACATCGT CTGGCCGCGT CATCCCGCCG
CGCGATACCG ACAGCTGA
|
|---|
| Protein sequence | MTIQRQAIIW ALFIALFVAG LWLLKGILLP FVAGMAIAYF LDPLADKLES YGLSRLAATG
MITIVFLLLA IVMLIVLVPV LYNQLIALVE IFPALMRRGQ EWLLTIGDGR LGRLLGVEGQ
DVEQAIRQSL GGSLDWLVNI LTSVGSQGLQ IVALLSLIVV TPVVAFYLLL DWDRMVERVD
ALLPRDHAET IRRLAREINE VLAGFIRGQV IVCLVLGTIY AVGLTLVGLR FGLIVGIVAG
IISFIPYLGT ILGFVVGLAL ALFQFGTDFV QVGMVIGVFA IGQFIEGNFL SPKLVGDRVK
LHPVWVMFAI FAFAALFGFV GALLALPIAA ALGVLARFGV AQYRKSQLYL GTSSGRVIPP
RDTDS
|
|---|
| |