Gene Plav_3297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3297 
Symbol 
ID5455658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3526961 
End bp3527359 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content66% 
IMG OID640878888 
ProductNADH:ubiquinone oxidoreductase 17.2 kD subunit 
Protein accessionYP_001414559 
Protein GI154253735 
COG category[C] Energy production and conversion 
COG ID[COG3761] NADH:ubiquinone oxidoreductase 17.2 kD subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.223243 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTTGT TTTCTGAAAT CTTCGTCTGG TGGAACGGCC AGACCATGGG CACCCGCTTC 
CATACCTGGC GAAAGGGCCG CCTCGTCGGC ACCGACGAGC AGGGCAACCG CTATTACGAG
TCGAAGGATG GCGCGGCGAT CAGCGGCTAT GCCCGCCGCT GGGTCATCTA TAACGGCCCG
GCCGAAGCCT CCCGCGTGCC GCCGGACTGG CATGGCTGGC TCCATCACAC CTTCGATGTG
CCGCCGACCG AGGAAGACTA CACGCCGCGC GAGTGGCAGA AGCCGCATAT GCCGAACCTC
ACCGGCACAC CGCACGCCTA CCGGCCGGAA GGCAGCCTCC TCAAGGGCGC GAACCGCCCG
CAGGCAACCG GCGACTACAA GGCGTGGCGG CCGGAGTGA
 
Protein sequence
MGLFSEIFVW WNGQTMGTRF HTWRKGRLVG TDEQGNRYYE SKDGAAISGY ARRWVIYNGP 
AEASRVPPDW HGWLHHTFDV PPTEEDYTPR EWQKPHMPNL TGTPHAYRPE GSLLKGANRP
QATGDYKAWR PE