| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3253 |
|---|
| Symbol | |
|---|
| ID | 5455798 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 3475284 |
|---|
| End bp | 3476747 |
|---|
| Gene Length | 1464 bp |
|---|
| Protein Length | 487 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640878844 |
|---|
| Product | aldehyde dehydrogenase |
|---|
| Protein accession | YP_001414515 |
|---|
| Protein GI | 154253691 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0133422 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTGG CGGAGCAGAC GACCCACGAA TCCGATTCGG CGACGATCTC GGCCTCCATT
CGGGCTATTC TCGACAGACA GAAGGCCGCG CACATCAGTG AGGGTCCGGC GAGCGCCGAA
CGCCGCATCG ACTGGATCGA CCGCGCCATC GCGCTCATCG TCGACAACCA GAAGGAAATC
GTTGAGGCCC TGGCATCCGA CTTCGGCCAT CGAAGCCATG AGCAGACCCT GCTGACGGAC
GTGATGGGGT CCATCGGACC GCTGAAGCAT GCGAAAAAAC ATCTGCGTCA GTGGATGAAG
CCGGAGAAAC GGAAAGTCCA GTTCCCGCTC GGTCTGCTAG GCGCAAAAGC GCGGGTTGAA
TATCAGCCGC TCGGCACGGT AGGCATCATC AGCCCCTGGA ACTTTCCGGT AAACCTGACC
TGGACGCCTC TGGCAGGCGT TTTTGCCGCC GGCAACCGCG CCATGATCAA GCCGTCCGAG
TTCACGCCCG CCACATCCGA GCTCATGGCG CGCATGCTGC GCGAAGCCTA TGACGAGACT
GAAGTCGCAG TGGTTACTGG TGGGCCGGCC GTGGGTGAAG CGTTCAGCCG CCAACCCTTC
GACCACCTTC TTTTTACCGG TGCCACCTCG ATCGCTTATC ACGTCATGCG TGCTGCTGCC
GAAAATCTCG TGCCGTTGAC GCTTGAACTC GGCGGCAAGT CGCCGGTCAT TATCTCAAAA
TCCGCGAAAA TGGATGACGC GGCGGCGCGG GTCATGAACG GCAAGACGCT CAATGCGGGT
CAGATTTGTC TGGCGCCGGA CTATGTCTTC GTTCCCGAAG GTAAGGTGGA CGAGTTCGTA
ACCGAGGCGA CCAAATCGGT CACCAAGATG CTGCCAACGA TGAAAGACAA CCCCGACTAC
ACCTCGATCA TCAACCAACG TCACTACGAT CGGCTCAACG GCCTGATCGA GGATGCGAGG
GGTAAGGGAG CCCGGATCGT CGAGATCAAT CCCGCGAATG AGGATTTCAG CCAGCAGCAG
GCGCACAAGA TTCCGCCTAC GCTTGTGCTG AACCCGACCG ATGACATGAA AATCATGCAG
GACGAAATCT TCGGACCGCT CTTGCCGATC AAGACGTATA AGGAAATTAA CGACGTGCTG
GGATACGTGA ATGCTCACGC ACGACCGCTC GGCCTCTACT ATTTCGGCGA CGATGAAAAA
GAAGAGCGTA CGGTGCTCGA CCGGACCACA TCCGGCGGCG TCACGCTCAA TGACGTGATC
ATGCATGTCT CAATGGAAGA TCTGCCTTTC GGCGGTGTCG GTCCGTCCGG TATGGGCGCC
TATCATGGTC TCGATGGTTT CCGGACCTTC AGCCACGCAA AGGCGGTCTA CAAGCAGTCA
AGGGCAAAGA TGGTTGCGGA GATGTTCCGC CCGCCCTACG GCGCCAAGAC GCGCAAGATG
CTTGCTTCGC AAATCAAGAA GTGA
|
|---|
| Protein sequence | MSLAEQTTHE SDSATISASI RAILDRQKAA HISEGPASAE RRIDWIDRAI ALIVDNQKEI
VEALASDFGH RSHEQTLLTD VMGSIGPLKH AKKHLRQWMK PEKRKVQFPL GLLGAKARVE
YQPLGTVGII SPWNFPVNLT WTPLAGVFAA GNRAMIKPSE FTPATSELMA RMLREAYDET
EVAVVTGGPA VGEAFSRQPF DHLLFTGATS IAYHVMRAAA ENLVPLTLEL GGKSPVIISK
SAKMDDAAAR VMNGKTLNAG QICLAPDYVF VPEGKVDEFV TEATKSVTKM LPTMKDNPDY
TSIINQRHYD RLNGLIEDAR GKGARIVEIN PANEDFSQQQ AHKIPPTLVL NPTDDMKIMQ
DEIFGPLLPI KTYKEINDVL GYVNAHARPL GLYYFGDDEK EERTVLDRTT SGGVTLNDVI
MHVSMEDLPF GGVGPSGMGA YHGLDGFRTF SHAKAVYKQS RAKMVAEMFR PPYGAKTRKM
LASQIKK
|
|---|
| |