| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3230 |
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| Symbol | |
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| ID | 5454516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3446359 |
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| End bp | 3448815 |
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| Gene Length | 2457 bp |
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| Protein Length | 818 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640878820 |
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| Product | ATP-dependent protease La |
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| Protein accession | YP_001414492 |
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| Protein GI | 154253668 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
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| TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.924948 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGAGA AAGACGATAA CAAGCAGGCT CCCGCCGGCG GCTCCGGCAA GGAAGGCGCT
TTGGTGCTTC CCGTGCTGCC GCTGCGCGAC ATCGTGGTCT TCCCGCATAT GATCGTGCCG
CTTTTTGTCG GTCGCGAGAA GTCCGTGCGT GCGCTTGAAA ATGTAATGCA GGACGACAAG
CAGATTGTGC TTGTGGCCCA GAAGAATGCT GCCGACGACA ATCCGGCTAC GGAAGATATT
TATGAGATCG GCGCCGTCGG TTCGGTGCTG CAGTTGCTCA AGCTTCCTGA CAACACTGTG
AAGGTGCTGG TCGAGGGCGT TCGCCGCGCC CGCGTGAAGC GCTATACCGG CAACGAGGAA
TTCTTCGAAG CCGAAGTGGA ACTCATCGAC GAGACTGATG CGGACGACGA ACAGCTCGAA
GGTCTGTCGC GATCCGTCGT GTCGCAGTTC GAAGGCTATG TGAAGCTCAA CAAGAAGGTG
CCGCCGGAAG TGCTCGGGTC GATCGGTCAG ATCGATGACC CGGCCAAGCT CGCCGACACA
GTTGCAAGCC ACATCAACAT CAAGATTCCC GAGAAGCAGG AGCTTCTCGA AATGTCGTCC
GTCGCGGAGC GGCTGGAGCG TGTCTACTCG CTTATGGAAG GCGAGATCAG CGTCCTCCAG
GTGGAAAAGC GTATCCGCAG CCGCGTCAAG CGTCAGATGG AGAAGACTCA GCGCGAGTAC
TATCTGAACG AGCAGATGAA GGCCATTCAG AAGGAACTCG GCGACGGCGA GGATGGTAAG
GACGAGATGC GCGAGCTCGA AGAGCGCATC CAGAAGACCA AGCTGTCCAA GGAAGCCCAT
GAAAAGGCCA TGGCTGAGCT GAAGAAGCTC AAGCAGATGA GCCCGATGTC GGCCGAAGCG
ACTGTCGTGC GCAACTATCT CGATTGGCTG CTGTCGGTTC CGTGGAAGAA GCGCAGCCGC
GTGAAGAAGG ATTTGCTCAG TGCACAACAG ATCCTCGATG CCGATCACTA CGGCCTCGAC
AAGGTCAAGG AACGCATCGT CGAATATCTC GCCGTGCAGA GCCGGTCGAA CAAGCTGAAG
GGGCCGATCC TGTGCCTTGT CGGACCGCCC GGCGTGGGCA AGACCTCGCT CGGCAAGTCG
ATCGCGCGTG CGACCGGCCG CGACTTCGTG CGCATGTCGC TCGGCGGCGT TCGCGACGAG
GCGGAAATCC GTGGTCACCG CCGCACCTAT ATCGGCTCGA TGCCCGGTAA GGTCATCCAG
TCGATGAAGA AGGTGAAGCA CACGAACCCG CTCTTCCTGC TCGACGAGAT CGACAAGATG
GGCTCGGACT TCCGTGGCGA TCCGTCTTCG GCACTTCTTG AAGTGCTCGA CCCGGAGCAG
AACGGTTCGT TCGCCGACCA TTATCTGGAG GTCGACTACG ATCTCTCCGA CGTCATGTTC
GTGACGACGG CGAACACGCT CAACATCCCT GAGCCGTTGA TGGACCGGAT GGAGATCATC
CGCATCGCCG GTTACACCGA GGATGAGAAG GTCGAAATCT CCCGTCGCCA TCTGATCCAG
AAGGCGGTTG AGGGACACGG TCTTCGCAAG GGCGAGTGGT CGATCGACGA CGAGGCGCTG
CGCCATCTCA TCCGCGTCTA TACGCGGGAG GCGGGCGTCC GCAATCTCGA GCGTGAGTTG
AACAATCTCG CCCGAAAGGC GGTGAAGGAA ATCCTCACCA CGCCGGGCAG GAAGTCGATC
AAGCTCACGA TGGAGAACAT CGCGGATTAC GCCGGCGTGC CGAAGTACCG TTACGGCGAA
GCCGAAGGCG AGGACCAGGT TGGTATCGTC ACCGGTCTCG CATGGACGGA AGTCGGCGGC
GAGCTGCTCA CCATCGAAGG CGTCATGATG CCCGGCAAGG GCCGCATGAC GGTAACGGGC
AACCTTCGCG ATGTGATGAA GGAGTCGATC TCCGCCGCGA GTTCATTCGT GCGCTCACGG
GCGACCCGCT TCGGCATTGA GCCTCCGCTC TTCGACCGCA GGGACATCCA CGTCCACGTG
CCCGAAGGTG CGACGCCGAA GGATGGTCCG TCCGCCGGCG TGGCCATGAC GGTCGCCATC
GTCTCTGTCA TGACCGGCAT CCCCGTCCGC AAGGACGTTG CCATGACGGG CGAAATGACG
CTGAGGGGCA GGGTGCTGCC CATTGGCGGC CTGAAGGAGA AGCTCCTTGC GGCCCTTCGT
GGCGGCATCA AGAAGGTGCT GATCCCGCAG GACAACGTGA AGGACCTGGC GGACATCCCG
GACAACGTGA AGAACAGTCT GGAGCTGGTG CCGGTGAACA CGTTGGACGA GGCGATCAAG
CATGCGCTGA CCCGCGTTCC GGATCCCATT GAGTGGGACG AGGAAGCGTG GCTGGCGGAA
CAGGCTGCCG CCGGTAAGCG GCAATCCGAT ACGCCGGAAC AGGTTATGGC GCATTAA
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| Protein sequence | MTEKDDNKQA PAGGSGKEGA LVLPVLPLRD IVVFPHMIVP LFVGREKSVR ALENVMQDDK
QIVLVAQKNA ADDNPATEDI YEIGAVGSVL QLLKLPDNTV KVLVEGVRRA RVKRYTGNEE
FFEAEVELID ETDADDEQLE GLSRSVVSQF EGYVKLNKKV PPEVLGSIGQ IDDPAKLADT
VASHINIKIP EKQELLEMSS VAERLERVYS LMEGEISVLQ VEKRIRSRVK RQMEKTQREY
YLNEQMKAIQ KELGDGEDGK DEMRELEERI QKTKLSKEAH EKAMAELKKL KQMSPMSAEA
TVVRNYLDWL LSVPWKKRSR VKKDLLSAQQ ILDADHYGLD KVKERIVEYL AVQSRSNKLK
GPILCLVGPP GVGKTSLGKS IARATGRDFV RMSLGGVRDE AEIRGHRRTY IGSMPGKVIQ
SMKKVKHTNP LFLLDEIDKM GSDFRGDPSS ALLEVLDPEQ NGSFADHYLE VDYDLSDVMF
VTTANTLNIP EPLMDRMEII RIAGYTEDEK VEISRRHLIQ KAVEGHGLRK GEWSIDDEAL
RHLIRVYTRE AGVRNLEREL NNLARKAVKE ILTTPGRKSI KLTMENIADY AGVPKYRYGE
AEGEDQVGIV TGLAWTEVGG ELLTIEGVMM PGKGRMTVTG NLRDVMKESI SAASSFVRSR
ATRFGIEPPL FDRRDIHVHV PEGATPKDGP SAGVAMTVAI VSVMTGIPVR KDVAMTGEMT
LRGRVLPIGG LKEKLLAALR GGIKKVLIPQ DNVKDLADIP DNVKNSLELV PVNTLDEAIK
HALTRVPDPI EWDEEAWLAE QAAAGKRQSD TPEQVMAH
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