| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3139 |
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| Symbol | |
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| ID | 5456863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3352277 |
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| End bp | 3353569 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640878729 |
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| Product | pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase |
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| Protein accession | YP_001414403 |
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| Protein GI | 154253579 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01349] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.596031 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACGA ACATACTGAT GCCCGCGCTC TCGCCGACCA TGGAAGAGGG AACGCTTGCC
AAGTGGCATG TGAAGGAAGG CGATGAGGTA AAATCCGGTG ACGTGATTGC CGAGATCGAA
ACCGACAAGG CGACGATGGA AGTGGAAGCG GTCGACGAAG GCCGTATCGG AAAGCTGCTC
GTAGCCGAAG GCACGGAAGG TGTCGCCGTC AACAAGCCCA TTGCCATTTT GCTGGAAGAG
GGCGAAGAGG CAGCGGACAT CGACAATGCG CCGCCACCGA AAAAGGATGA ACCAAAGACA
TCCGCGAAAC CGGAAGCAAA AGAAGTCGAG AAGCCACGGT CCAGCGCAAC CCCGTCTTCG
GATGGTAACG CTCGTCCCAC GCAGGCGACC GGCACGGGGC ATCGCGTTTT TGCGTCCCCG
CTTGCGCGGC GCATTGCGGA ACAGCAAGGC ATCGATCTTT CCGCCATCAG CGGCTCTGGT
CCCAACGGCC GCATCGTAAA GGCGGACCTG GAAGGTGCGG CGAAGGCCGC GCCGAAGAAG
CAAGCGGCGG GCGCTGTTGC CCAGGGTGCG GCACAGAGCA TCGACCCCCG TGCATATTAT
GCGGAAGGAA CCTTTGAAGA GGTTTCACTC GATGGAATGC GGCGGACAAT CGCCCGCCGC
CTCACGCAGT CAATGCAGGA GATACCGCAT TTCTATCTGA CGATAGACTG CGAGCTGGAC
GAGCTGCTGA AAGCGCGCAA GAAGTTGAAC GACGAAGCAG GCGAGGGCGT CAAGCTCTCG
GTAAACGACT TCCTGATCCG CGCTGCCGCG CTCGCCCTCA TCAAGGTGCC GGATGCGAAT
GTGAGCTTTG CCGGCAACGC TCTCCTGAAG CACAAGAGCG CCGACATAGG TATCGCGGTC
GCTCTTGAAG GCGGCCTCAT CACGCCGATT ATTCGCAACG CGGACAAAAA AGGCCTCGCC
GAAATATCGA ATGAGGCCAA AGAACTTGCC GAGCGAGCGC GTAACAAAAA GCTGAAGCCG
AACGAATACG AAGGCGGCTC CTTTTCAATT TCCAATCTCG GCATGTTCGG CATCAAGCAT
TTCACCGCTG TCATCAATCC GCCCCAAGCC GCCATCCTCG CGGTCGGCAA GGGCGAGGAG
CGCCCGGTGG TGAGAAATGG CAAGGTTGAA GTCGCCACAA TAATGACGGT CACCATGTCC
TGCGACCACC GCGCCATCGA TGGCGCACTC GGCGCACGCT TCCTCGAAGC GTTCAGATCA
TTCGTGGAAT ACCCGGCAAG GATGCTGCTC TGA
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| Protein sequence | MPTNILMPAL SPTMEEGTLA KWHVKEGDEV KSGDVIAEIE TDKATMEVEA VDEGRIGKLL
VAEGTEGVAV NKPIAILLEE GEEAADIDNA PPPKKDEPKT SAKPEAKEVE KPRSSATPSS
DGNARPTQAT GTGHRVFASP LARRIAEQQG IDLSAISGSG PNGRIVKADL EGAAKAAPKK
QAAGAVAQGA AQSIDPRAYY AEGTFEEVSL DGMRRTIARR LTQSMQEIPH FYLTIDCELD
ELLKARKKLN DEAGEGVKLS VNDFLIRAAA LALIKVPDAN VSFAGNALLK HKSADIGIAV
ALEGGLITPI IRNADKKGLA EISNEAKELA ERARNKKLKP NEYEGGSFSI SNLGMFGIKH
FTAVINPPQA AILAVGKGEE RPVVRNGKVE VATIMTVTMS CDHRAIDGAL GARFLEAFRS
FVEYPARMLL
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