| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3130 |
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| Symbol | |
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| ID | 5453567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3343244 |
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| End bp | 3344359 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640878720 |
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| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
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| Protein accession | YP_001414394 |
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| Protein GI | 154253570 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0945514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.27094 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCAAG TGGCTCACGC ACTTGGCACA GGCGTGCCAC CCGAGGCGAA TGTAATCCTC
AAATCGATGC CGCATCCGGT CATCCTCGTG GACCGCGAAA GCCGTATTGA ATATGTGAAC
GACAGCGCCG AAGAGTTCTT TGCGGCAAGC TCTGCAATGC TGCTCGGCCA TCGGTTGAGT
GAGGTGGTGG CCTTCGGCAG TCCCGTGCTG GCGCTGATCG AACAGGTGTT CGAGCGCGGC
GTATCCGTTA ATGAGTACGG TGTCGAAATC GGAACGCCAC GCATCGGCGA CCGGCAGGTC
GACATCCAGG TAACGCCGCT CGCGGAATAT CCGGGCCACG TCCTCTTGCT GCTCCAGGTC
CGCACCATGG CGCAAAAGAT GGACCGGCAG CTTACCCATC GGGGGGCGGC TCGCTCCGTT
ACCGGCATGG CCGCCATTCT TGCGCATGAA ATCAAAAATC CACTGTCCGG CATCCGCGGC
GCCGCGCAGC TTCTCGAATT GTCGGGTTCA CCGGACGACA AGACATTGAC CCGCCTTATT
TGCGAAGAGA CGGATCGTAT CTGCAAGCTG GTCGACCGTA TGGAAGTGTT TTCGGATGAG
CGCCCCGTGC CGCGCGAGCC GGTAAACATT CATCTGGTTC TCGGCCACGT GAAACAGTTG
GCTACCACCG GTTTCGCGAG AGGCATCCGC ATTGTCGAGG AATATGACCC CTCGCTTCCT
CCCGTACTCG GCGATAAAGA CCAGTTGATT CAGGTCTTTC TCAATCTCGT GAAGAACGCC
GCGGAAGCGA TCGGAAACCC CGATGGCGAG ATTGTCCTGA CGACGGCCTA TCGTCCGGGC
GTAAGGCTTT CGATGCCCGG CAGCCGGGAC CGTGTCAGTC TGCCTCTCGA AATCTGTGTG
ATCGATGATG GTCCAGGCGT CGCTGATGAC CTGATGGAGC ATCTCTTCGA TCCGTTCGTC
ACGACGAAAT CTTCCGGAAC AGGTCTGGGT CTGGCGCTGG TCGCCAAGAT CATTGGCGAT
CACGGCGGCA TCATCGAATG TGAAAGCCTG CCGCGCCGAA CAATTTTCCG CGTGTTGCTG
CCGATGCATA CCGGCGCGAC CGCAAATCAC AATTAG
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| Protein sequence | MSQVAHALGT GVPPEANVIL KSMPHPVILV DRESRIEYVN DSAEEFFAAS SAMLLGHRLS
EVVAFGSPVL ALIEQVFERG VSVNEYGVEI GTPRIGDRQV DIQVTPLAEY PGHVLLLLQV
RTMAQKMDRQ LTHRGAARSV TGMAAILAHE IKNPLSGIRG AAQLLELSGS PDDKTLTRLI
CEETDRICKL VDRMEVFSDE RPVPREPVNI HLVLGHVKQL ATTGFARGIR IVEEYDPSLP
PVLGDKDQLI QVFLNLVKNA AEAIGNPDGE IVLTTAYRPG VRLSMPGSRD RVSLPLEICV
IDDGPGVADD LMEHLFDPFV TTKSSGTGLG LALVAKIIGD HGGIIECESL PRRTIFRVLL
PMHTGATANH N
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