| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3078 |
|---|
| Symbol | |
|---|
| ID | 5455487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 3286137 |
|---|
| End bp | 3286886 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640878667 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001414342 |
|---|
| Protein GI | 154253518 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2928] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 0.181609 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATC AGCAGAGCGA AGACCCGGAG CGGCCCGGTA CAGAGCCCCA TTTGATTCTG
CCGGGAAAGC CCTCACGGTT TACCACCCGG ATCCGCAATT ATTTTTTCAC CGGCCTCGTG
GTCGCGGCAC CCATAGGGCT CACCATCTGG ATCACGAGCT GGTTCATCGA TCTTGTCGAT
ACCTGGTTCA CCCCTCTTAT TCCCGATCGC TATCAGCCAG ACAACTACCT TCCGTTCGAT
ATTCCCGGTC TCGGTCTCAT CATCGCCTTC GTTCTGTTGA CATTGCTCGG GGCGCTCACT
GCCAATTTCT TCGGGCGCGC CGTCCTCAAT TTCGGCGAAC GCATGGTGGC GCGCATGCCT
GTCGTGCGCA GCATTTACGG CGCGCTCAAG CAGATTTTCG AAACGGTCAT CTCCCAATCC
AATGCTTCGT TTCGCGAAGT CGGGCTGATT GAGTATCCCC GCAAAGGCAT TTTCTGCATC
GTCTTCATCA CCACACAGAC CAGCGGGGAG CTCGTCGACC GGACGGGTCA TGAGCTCGTC
AGCGTGTTCC TGCCCACGAC GCCCAACCCG ACCTCGGGGT TTCTGCTTTT TGTACCGCGC
GAGGATGTGC AAGTTCTGGA TATGACGATT GAAGAAGGCG CAAAGCTCAT TATCTCCGCC
GGACTTGTCG AGCCGTCGCG GAAAATTGCG ACTGAGCCGG CAGAAAAGGT CGCGGTCTCC
AACTCGTCCG TGACATCACC CCGAACGTAG
|
|---|
| Protein sequence | MSDQQSEDPE RPGTEPHLIL PGKPSRFTTR IRNYFFTGLV VAAPIGLTIW ITSWFIDLVD
TWFTPLIPDR YQPDNYLPFD IPGLGLIIAF VLLTLLGALT ANFFGRAVLN FGERMVARMP
VVRSIYGALK QIFETVISQS NASFREVGLI EYPRKGIFCI VFITTQTSGE LVDRTGHELV
SVFLPTTPNP TSGFLLFVPR EDVQVLDMTI EEGAKLIISA GLVEPSRKIA TEPAEKVAVS
NSSVTSPRT
|
|---|
| |