| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3040 |
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| Symbol | |
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| ID | 5455952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3239977 |
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| End bp | 3240822 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640878628 |
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| Product | putative phytoene synthase |
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| Protein accession | YP_001414304 |
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| Protein GI | 154253480 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGATG AAGCAATGAG CGTCAGCATG AAAACGAGCC TCGACGAGGT TCGACGGTAC
GATCACGACC GTTTCCTGAC GCTGCTCTTC GCGCCGATGC CGCAACGCCT GTCGCTTATT
GCGCTTTATG CCTTCAATCT GGAAATTGCC CGTGTCGCGG AAAACGTTAC CGAGCCGATG
ATGGGTCATA TCCGCCTGCA ATGGTGGCGG GAAACTCTCG AAGGCCTGCC GAACGGCGAG
ACGAGGGGGC ATGCCGTTGC TGCTGCCGTT GCCGAGGCGG ATCTGAAAAT CCCGAGGCTG
CAGGCATTGA TCGACGCGCG GGAGCGTGAT CTTTCGGAAG ATGTATTTGA AGACGTCGCC
ATGCTCGACA GCTATGCGGA GAAAACATCC GCCGCCGTCA TGGATATCGC GGCGCGGGCG
CTCGGCGGTG AGGAGAAGGC GGATGCTGCG GCGGATGCCA TCCGCCATGC GGGCATCGCC
TATGCACTGA CCGGGCTTCT CCGGGCGCTT CCTGTTCACG CTTCGCAGGG GCGGCTGACA
ATGCCCGCCG ATGTGCTGCT CCGGTGCAAT GTCGATCCAC ATACGGTATT GGCCGGTGAA
ATGACCGAGG GCCTTCGTGC CGTGATCCAG GATGTCGCGG ATCATGCCCG CAGCCATCTC
TCGGCGGCGC GCATGGCGCA TTTCGATCCG CAGCTTCTCC CCGCGCTTAT GCCGGCATCG
CTTTGCGACC GCTATCTCGA CATGATGACA GCGCCCGGCT TCGATCCGTT CCGCGATCGA
ACGGATGTTC CCGCCTTCCG CCGCCAGCTC AGGCTGCTTG GAAGAAACTT CAGGAAAAAA
ATCTGA
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| Protein sequence | MADEAMSVSM KTSLDEVRRY DHDRFLTLLF APMPQRLSLI ALYAFNLEIA RVAENVTEPM
MGHIRLQWWR ETLEGLPNGE TRGHAVAAAV AEADLKIPRL QALIDARERD LSEDVFEDVA
MLDSYAEKTS AAVMDIAARA LGGEEKADAA ADAIRHAGIA YALTGLLRAL PVHASQGRLT
MPADVLLRCN VDPHTVLAGE MTEGLRAVIQ DVADHARSHL SAARMAHFDP QLLPALMPAS
LCDRYLDMMT APGFDPFRDR TDVPAFRRQL RLLGRNFRKK I
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