Gene Plav_2968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2968 
Symbol 
ID5455947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3167880 
End bp3168299 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content54% 
IMG OID640878552 
ProductNADH-ubiquinone oxidoreductase chain 4L 
Protein accessionYP_001414232 
Protein GI154253408 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1006] Multisubunit Na+/H+ antiporter, MnhC subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.197144 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAGA TTATTCTCGA TCTGGAATTT GTCGTCGGTC ATTACAATTA CTGGATGTTC 
GTCATTCTGA TGATGACCGG AATGTACGTG ACCGTCAGCC GTGGCAATCT CGTAAAAAAG
ATCGTCGGCC TGAACATCTT TCAATCATCC GTCTTCATGC TCTACATCTC GATGGGCAAG
GTCATCGGCG GCACGCCCCC CGTGCTTATC GACGATCCGG ATGCGGTCTA TTCAAATCCC
CTGCCCCACG TCCTGATCCT CACCGCCATC GTGGTCGGCA TTGCAACAAC GGCGCTTGCG
CTCGCTCTGG TCGTTCGCAT CCGGGAAACC TATGGCACCA TCGAGGAGGA CGAACTTCTC
GTCATGGAGC ATGAGATGGA ATTCGCCGAA GGCGTTCTTC AGGGTGAGGT ATCCCGCTGA
 
Protein sequence
MSEIILDLEF VVGHYNYWMF VILMMTGMYV TVSRGNLVKK IVGLNIFQSS VFMLYISMGK 
VIGGTPPVLI DDPDAVYSNP LPHVLILTAI VVGIATTALA LALVVRIRET YGTIEEDELL
VMEHEMEFAE GVLQGEVSR