Gene Plav_2957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2957 
Symbol 
ID5456667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3155848 
End bp3156183 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content69% 
IMG OID640878541 
Producthypothetical protein 
Protein accessionYP_001414221 
Protein GI154253397 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.0031503 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGAAC CCGCCGCAAA CCACGATCAG GTGCTGGAGG AGGCCGCCCG CTGGCGCGCG 
GAGGGCCACA AGGTCGCCCT CGCCACTGTC ATTGAAACCT GGGGTTCGGC CCCGCGTCCG
GTCGGCAGCC AGCTCGCCAT CCGCGACGAC AGCGAATTCG TCGGCTCCGT CTCCGGCGGC
TGCATCGAAG GCGATGTCGT CACCCGCGCC CTCGACGCGC TCGCCACCGG CAAGCCCGAA
ATCGTCGAAT ATGGCGTCAG CGACGCCATG GCCTGGGAAG TCGGCCTCGC CTGCGGCGGC
CGCATCCGCG TCATGGTCGA ACCGGTATCG GGCTGA
 
Protein sequence
MTEPAANHDQ VLEEAARWRA EGHKVALATV IETWGSAPRP VGSQLAIRDD SEFVGSVSGG 
CIEGDVVTRA LDALATGKPE IVEYGVSDAM AWEVGLACGG RIRVMVEPVS G