Gene Plav_2870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2870 
Symbol 
ID5454389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3074846 
End bp3075472 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content60% 
IMG OID640878452 
Producthypothetical protein 
Protein accessionYP_001414134 
Protein GI154253310 
COG category[S] Function unknown 
COG ID[COG3216] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.0163842 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTTCGCC GTAGAGTTGA GCTTCACCCG ATTCAGAAAA TCCGGGAGAT TTTCTGGCCG 
CGCTCCGGAT GGAAGCGCAC GCTGCAATAT GGGTGGCGGC GCGTCTGGCG GCTTTCGGGC
ACGCCGCATG CCATAGCGCT CGGCGTCGCG GCGGGAGCCT TTTCCTCCTG CACACCTTTT
CTCGGGTTTC ATATTCTGCT GGCGATGCTG GTCGCATGGG TTTTACGCGG CAATTTGATT
GCCTCGGCGA TTGGGACGTT TGTCGGGAAC CCACTGACTT TTCCTGCAAT CTGGTTCGTG
GTCTATGAGG CTGGCCACTT CATCATAGGG TCACCCACCC CTGCGGACCC GGACATTGCG
GAGACACTGC AAAGCGAACG CGCCTTCGAC ATGATATTGC CGCTGTTGGT GCCGCTGACC
GTGGGATCGA TCCCGGTGGG TATCATGCTC GGCGGCGTTT CCTACATCGT GGTTCGGAGC
GGCGTTGAGG CCTATCAGGG GCAGCGGCGA AAAATGCTCA CCGAAAGGGT GTTGCTGAGG
CAGGCCGTCA GCAGAGAGCC CGGCGTCTCA TCCGAGAGCG ACAGCGCGGC AAATGACCCA
TGGTTGAACG GGGGAGACAC AAGGTGA
 
Protein sequence
MFRRRVELHP IQKIREIFWP RSGWKRTLQY GWRRVWRLSG TPHAIALGVA AGAFSSCTPF 
LGFHILLAML VAWVLRGNLI ASAIGTFVGN PLTFPAIWFV VYEAGHFIIG SPTPADPDIA
ETLQSERAFD MILPLLVPLT VGSIPVGIML GGVSYIVVRS GVEAYQGQRR KMLTERVLLR
QAVSREPGVS SESDSAANDP WLNGGDTR