Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2870 |
Symbol | |
ID | 5454389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 3074846 |
End bp | 3075472 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640878452 |
Product | hypothetical protein |
Protein accession | YP_001414134 |
Protein GI | 154253310 |
COG category | [S] Function unknown |
COG ID | [COG3216] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.0163842 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTTCGCC GTAGAGTTGA GCTTCACCCG ATTCAGAAAA TCCGGGAGAT TTTCTGGCCG CGCTCCGGAT GGAAGCGCAC GCTGCAATAT GGGTGGCGGC GCGTCTGGCG GCTTTCGGGC ACGCCGCATG CCATAGCGCT CGGCGTCGCG GCGGGAGCCT TTTCCTCCTG CACACCTTTT CTCGGGTTTC ATATTCTGCT GGCGATGCTG GTCGCATGGG TTTTACGCGG CAATTTGATT GCCTCGGCGA TTGGGACGTT TGTCGGGAAC CCACTGACTT TTCCTGCAAT CTGGTTCGTG GTCTATGAGG CTGGCCACTT CATCATAGGG TCACCCACCC CTGCGGACCC GGACATTGCG GAGACACTGC AAAGCGAACG CGCCTTCGAC ATGATATTGC CGCTGTTGGT GCCGCTGACC GTGGGATCGA TCCCGGTGGG TATCATGCTC GGCGGCGTTT CCTACATCGT GGTTCGGAGC GGCGTTGAGG CCTATCAGGG GCAGCGGCGA AAAATGCTCA CCGAAAGGGT GTTGCTGAGG CAGGCCGTCA GCAGAGAGCC CGGCGTCTCA TCCGAGAGCG ACAGCGCGGC AAATGACCCA TGGTTGAACG GGGGAGACAC AAGGTGA
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Protein sequence | MFRRRVELHP IQKIREIFWP RSGWKRTLQY GWRRVWRLSG TPHAIALGVA AGAFSSCTPF LGFHILLAML VAWVLRGNLI ASAIGTFVGN PLTFPAIWFV VYEAGHFIIG SPTPADPDIA ETLQSERAFD MILPLLVPLT VGSIPVGIML GGVSYIVVRS GVEAYQGQRR KMLTERVLLR QAVSREPGVS SESDSAANDP WLNGGDTR
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