Gene Plav_2808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2808 
Symbol 
ID5453603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3012027 
End bp3012848 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content60% 
IMG OID640878390 
Producthypothetical protein 
Protein accessionYP_001414073 
Protein GI154253249 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.70434 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.727732 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGCGAA GCCTGAGAAT AGCCCGGTTT TCCGCCATTT TTATCATTGC CGGCAGCATG 
GCGGCGGAGG CGGCGCCGAC ATTGCAGATG CATCGCGCGG TCTATGACCT CACGCTCGGA
CGGACACAGC CGGTGAGCGA TATTACCGGC ATCCGTGGAC GGATGGTGGT CGAATGGCGC
GGCGGCCCCA AATGTGGGGG CTATACGTCG CTGCAGCGCG TGGTCACGCA TGTAACGGGT
GTCGATGATG ACAGCGTCAG CAATGACGTG CGGCTGAGTT ACTGGGAGGC AGCGGATGGC
GACCAGTTCA CGTTCACGCG GACGGAATAT ACCAACGGGC AACTGACCGG ACAGGAAGAG
GGAAGCGCCG AACGCGACAA AAATGGCGGA AGCGTGCGGG TTTTCCGTGA GGGAGATGAG
CCGCTGGCGA TGCCGGGCGA TGTCCTCTTC CCCATCGCCT ACAACCTCGC GCTGATCGAA
AAAGCGCAAG CAGGACAGCG TGTTTTCAGC AGGGCGCTGT TTGACGGGAC AGAGCCGGGA
GAGAATCCGA CCACGGCTTT CATCGGGAAA CCCTTGTCGA AACAATGGGT TGGCGAGGGT
GTGGAGGTGG AAGGCGAAGG GAAATCGCTT TCGGCAATGC GGCCCTGGCC GGTGCGCATC
AGCTATTTCG ACCCGGCGGA CCGGGAAGGC GTGCCGAGCT TCGAGATGGG ATATGTCTTG
TTTCCCAATG GGATAGCCGC CGAGCTGACG CTTGATTACC TCGATGTGCA GCTCAAGGGC
CGGCTCAGCG AGCTGACTTA TTTCGCGCCG GATTCCTGCT GA
 
Protein sequence
MTRSLRIARF SAIFIIAGSM AAEAAPTLQM HRAVYDLTLG RTQPVSDITG IRGRMVVEWR 
GGPKCGGYTS LQRVVTHVTG VDDDSVSNDV RLSYWEAADG DQFTFTRTEY TNGQLTGQEE
GSAERDKNGG SVRVFREGDE PLAMPGDVLF PIAYNLALIE KAQAGQRVFS RALFDGTEPG
ENPTTAFIGK PLSKQWVGEG VEVEGEGKSL SAMRPWPVRI SYFDPADREG VPSFEMGYVL
FPNGIAAELT LDYLDVQLKG RLSELTYFAP DSC