Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2808 |
Symbol | |
ID | 5453603 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 3012027 |
End bp | 3012848 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640878390 |
Product | hypothetical protein |
Protein accession | YP_001414073 |
Protein GI | 154253249 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.70434 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 0.727732 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGACGCGAA GCCTGAGAAT AGCCCGGTTT TCCGCCATTT TTATCATTGC CGGCAGCATG GCGGCGGAGG CGGCGCCGAC ATTGCAGATG CATCGCGCGG TCTATGACCT CACGCTCGGA CGGACACAGC CGGTGAGCGA TATTACCGGC ATCCGTGGAC GGATGGTGGT CGAATGGCGC GGCGGCCCCA AATGTGGGGG CTATACGTCG CTGCAGCGCG TGGTCACGCA TGTAACGGGT GTCGATGATG ACAGCGTCAG CAATGACGTG CGGCTGAGTT ACTGGGAGGC AGCGGATGGC GACCAGTTCA CGTTCACGCG GACGGAATAT ACCAACGGGC AACTGACCGG ACAGGAAGAG GGAAGCGCCG AACGCGACAA AAATGGCGGA AGCGTGCGGG TTTTCCGTGA GGGAGATGAG CCGCTGGCGA TGCCGGGCGA TGTCCTCTTC CCCATCGCCT ACAACCTCGC GCTGATCGAA AAAGCGCAAG CAGGACAGCG TGTTTTCAGC AGGGCGCTGT TTGACGGGAC AGAGCCGGGA GAGAATCCGA CCACGGCTTT CATCGGGAAA CCCTTGTCGA AACAATGGGT TGGCGAGGGT GTGGAGGTGG AAGGCGAAGG GAAATCGCTT TCGGCAATGC GGCCCTGGCC GGTGCGCATC AGCTATTTCG ACCCGGCGGA CCGGGAAGGC GTGCCGAGCT TCGAGATGGG ATATGTCTTG TTTCCCAATG GGATAGCCGC CGAGCTGACG CTTGATTACC TCGATGTGCA GCTCAAGGGC CGGCTCAGCG AGCTGACTTA TTTCGCGCCG GATTCCTGCT GA
|
Protein sequence | MTRSLRIARF SAIFIIAGSM AAEAAPTLQM HRAVYDLTLG RTQPVSDITG IRGRMVVEWR GGPKCGGYTS LQRVVTHVTG VDDDSVSNDV RLSYWEAADG DQFTFTRTEY TNGQLTGQEE GSAERDKNGG SVRVFREGDE PLAMPGDVLF PIAYNLALIE KAQAGQRVFS RALFDGTEPG ENPTTAFIGK PLSKQWVGEG VEVEGEGKSL SAMRPWPVRI SYFDPADREG VPSFEMGYVL FPNGIAAELT LDYLDVQLKG RLSELTYFAP DSC
|
| |