| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2780 |
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| Symbol | |
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| ID | 5456010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2980506 |
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| End bp | 2981678 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640878362 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001414045 |
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| Protein GI | 154253221 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.0393743 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGCGA ACGACTATCC ATCGCTCGAT TTCGACCTCG GAGAGACGGC GGACATGATC
CGCGACACCG TGCGCGCCTT CACCGCCGAC AAGATATCCC CGCGCGCTGC CGAGATAGAC
CGGACGAACG AATTTCCTCG CGATCTCTGG CCGCAACTTG GTGAGCTTGG GCTCTTGGGG
ATTACCGTCG AAGAAGAATA TGGCGGGACG GGGCTCGGCT ATCTCGAGCA TGTCGTGGCG
ATGGAGGAAA TCAGCCGGGG TTCGGCGAGT GTCGGGCTTT CCTATGGCGC GCATTCCAAT
CTTTGCGTCA ACCAGCTCCG CCGCTGGGGC ACCGACGCGC AGAAGCGCAA ATACCTGACG
AAGCTCATGT CGGGCGAGCA TGTGGGCGCG CTTGCCATGT CGGAGCCGGG CGCGGGATCG
GACGTCGTGT CGATGCGGCT GAAGGCAGAG AAGAAAGGCG ACCGTTTTGT GCTCAACGGC
AGCAAGATGT GGATCACCAA CGCCCCCGAC GCCGAGACGC TGATCGTCTA TGCGAAAACA
GATGCGAGTG CGGGGCCGAA AGGCATTACG CCGTTCCTTA TCGAGAAGGG AATGAAGGGT
TTCCGCCCGG CGCAAAAGCT CGACAAGCTC GGCATGCGCG GTTCGAACAC CGCCGAACTC
GTGTTCGAGG ATTGCGAGGT GCCGGAGGAG AATGTTCTGG GCAAGCTGAA TGAGGGCGTG
CGTGTGCTGA TGTCCGGTCT CGATTACGAG CGTGCTGTGC TCGCCGCTGG GCCGCTCGGC
ATCATGCAGG CCTGCATGGA TGCCGTGATC CCCTACGTCC ACGAGCGCAA GCAGTTCGGC
GAGCCGATTG GCACGTTCCA GCTCATGCAG GGCAAGCTTG CGGACATGTA TTCGACGATG
AATGCCTGCC GCGCTTATGT CTATGCGGTG GCGAAAGCCT GCGACCGGGG ACAAACCACG
CGCAAGGACG CGGCGGGTGC GATCCTTTAT GCCGCGGAAA AGGCAACGTG GATGGCGCTG
GAAGCCATTC AGGCCTTGGG CGGCAACGGC TACATCAACG ACTATTCGAC AGGCCGCCTG
TTGCGCGACG CCAAGCTCTA CGAGATCGGG GCGGGGACAA GTGAGATACG CCGCATGCTG
ATTGGCCGCG AACTCTTCAA CGAGACGGCC TGA
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| Protein sequence | MLANDYPSLD FDLGETADMI RDTVRAFTAD KISPRAAEID RTNEFPRDLW PQLGELGLLG
ITVEEEYGGT GLGYLEHVVA MEEISRGSAS VGLSYGAHSN LCVNQLRRWG TDAQKRKYLT
KLMSGEHVGA LAMSEPGAGS DVVSMRLKAE KKGDRFVLNG SKMWITNAPD AETLIVYAKT
DASAGPKGIT PFLIEKGMKG FRPAQKLDKL GMRGSNTAEL VFEDCEVPEE NVLGKLNEGV
RVLMSGLDYE RAVLAAGPLG IMQACMDAVI PYVHERKQFG EPIGTFQLMQ GKLADMYSTM
NACRAYVYAV AKACDRGQTT RKDAAGAILY AAEKATWMAL EAIQALGGNG YINDYSTGRL
LRDAKLYEIG AGTSEIRRML IGRELFNETA
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