Gene Plav_2720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2720 
Symbol 
ID5453570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2925797 
End bp2926882 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content64% 
IMG OID640878298 
Producthypothetical protein 
Protein accessionYP_001413985 
Protein GI154253161 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0758469 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.520396 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGATGA GAATCGCTAT TCTGCTCGCA GGTTTGTTGA TCTGGGACGT CGTGACATCT 
GAGAACGAGC AATCCGCGTT GGAACGCAGC GGGCAGGCCC TGATGAATTT CGGCCCTGTC
CGCGATCTCG TGAGTTACGC TGAGGATGGC GCGCTGGTTG AAGACGTGCA GTCCCTGACT
GCTCTGGTTT CCAGCGAAGC GGCGGCGGCC GTCGCGGCGC GAAACGTCGT CGAGGCGGAG
CGGGCGGAGC GACGAGCGGC ACGGGAAAGA CGACGGGAAC AACTTCGTCT TGCGCCAGAA
GATGTCGACG CCATCGCCAA GGCGGTTACA GAACTCTATC GCGAGGAAGA AGAGCGCGCG
GCGGAAGCTT CCGCACCGCA GGCGATGGCT GCGCCGGCAC AGCCACCTGC CCCCGAGCCG
GAGATCGTCG AGCGTTCGGT GGTTTCACTC GGCCCGGATA TTCTCGGCGC CATTGTGGAC
GCTTCCAAGA AGACCGGCGC CAATTCAGGC TATCTGCTTC ACATCGCCTT GCGGGAGAGC
GGTCTGGCTC TTGGCGCGCA GGCGCCGACT TCGTCCGCGA CCGGGCCTTT CCAATTCATT
CAGCAGACCT GGTACCAGAT GCTCGGCACG TATGGTCCCA AGCATGGGTT GAAGGCGGAA
GCGGCGCTTC TGAAGAAAGC GGCGAACGGC ACCTATGCGC CGGTTTCGGC GGCGGCACGG
ACGGAAGTGC TGGCTCTGCG GACTGATCCC AGCGTTGCGG CGCTGATGGC CGGCGAACTC
ACCATGGAGA ACGCGAAGTC GATGGAGAGG CTGCTTGGCC GCTCGCCGGC ACATGGCGAA
CTCTATGCGG CTCATGTCTT CGGTCCGGCG GGGGCAGCGA AGCTGGTACG AACGCGCGAC
ACGGCGGCAG CTACCTCGGC GGCTTCGATC CTGCCATCCG CGGCAGCGGC CAATCGGTGG
CTATTCTATA CGTCGGGCGG GACGGCGCGC AGCGTCGCTT CGCTGTTCGA CGAGCTGAGC
CGGTTTATGT CCACTAGGGA GGTCGCGCAG GTATGCAATG CGAACCTGAA CTTCCTGGGG
GTCTAG
 
Protein sequence
MWMRIAILLA GLLIWDVVTS ENEQSALERS GQALMNFGPV RDLVSYAEDG ALVEDVQSLT 
ALVSSEAAAA VAARNVVEAE RAERRAARER RREQLRLAPE DVDAIAKAVT ELYREEEERA
AEASAPQAMA APAQPPAPEP EIVERSVVSL GPDILGAIVD ASKKTGANSG YLLHIALRES
GLALGAQAPT SSATGPFQFI QQTWYQMLGT YGPKHGLKAE AALLKKAANG TYAPVSAAAR
TEVLALRTDP SVAALMAGEL TMENAKSMER LLGRSPAHGE LYAAHVFGPA GAAKLVRTRD
TAAATSAASI LPSAAAANRW LFYTSGGTAR SVASLFDELS RFMSTREVAQ VCNANLNFLG
V