| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2633 |
|---|
| Symbol | |
|---|
| ID | 5454398 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 2837157 |
|---|
| End bp | 2839148 |
|---|
| Gene Length | 1992 bp |
|---|
| Protein Length | 663 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640878210 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001413898 |
|---|
| Protein GI | 154253074 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3211] Predicted phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.541244 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 0.427189 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAGT GCGATTCGCG AGGCGAGCAA CTCGAAGCCG CGGACGACGA GCCGGTGGCG
CGCGCAACCG CGCCCTCGCT CGCCACGCTC TGGCAACGCC GCATCGGCCG GCGCGATCTC
CTCTCCGGCT TCGGCAAGGC GGCTCTCCTC GCCACGGTTT CGCCCGCCAT CCTCTCGCTC
GCAGCCTGTG ACGACACGCC CCAATACACG CCCGATGATA TTTTCGGTTT CGAGGAAGTG
CCGCACGGCA TCGACGAAAC CCACCACATA GCCGCGGATC ACAACGCCGG CATCCTCATC
CGCTGGGGCG ACCCCGTCCT GCCGGGCGCT CCGCCCTTCA ACGTCCTCGA ACAGAGCGCC
GCTTCTCAGC TTGCACAGTT CGGCTACAAC AACGACTACA TCGGCTTCAT TCCCCTGCCC
TATGGGTCGA ACGCCAGCGA TCGCGGCCTG CTCTGCATCC ATCACGAATA TACCAATGAC
GATCTCATGC ATGCGGGCAT GGCTGACGCG GACCCGCGCG AGTTCTACAC GCGCCGCATC
GCGGAAATAT CGATGGCCGC GCATGGCGGA ACGATCGTCG AGGTCGCGCG CGACGGCAAC
GGCAACTGGC AGGTCGTGAC GGAAAGCAAA TACAACCGCC GCATCACTCC GCTCTCCACC
ACCATGAGCA TCTCCGGCCC GGCCGCCGGC CATCCGCGCC TGCAGACGAG CGAGGACCCC
ACCGGTCACA ATGTCATGGG TACGTTCAAC AACTGCGCCG GCGGCATCAC GCCTTGGGGC
ACATGGCTTA TGTCGGAGGA GAACTTCAAC TTCTACTTCA TCGGCCAGCC CTCCGACGAG
GCGGAAGCCG CAAACCATGA ACGCATGGGT TTCCCCGCCG GCCGCGCCTA TCCCTGGGGT
GCCTATCACA AGCGGTTCGA CCTCGCCGCC GAACCGCGAG AGCCAAACCG TTATGGCTGG
GTGGTGGAGG TCGATCCGCT CGATCCCGCC TCCACGCCGG TCAAGCGTAC GGCGCTCGGC
CGCTTCAAGC ATGAAGGCTG CGAGAACGCG CTGACGAAGG ATGGCCGCCT CGTCGTTTAC
ATGGGCGACG ACCAGCAGTT CGAATATCTC TACAAATTCG TCACCGCCGG AATGGTCGAT
GCCGGCGATC GCGCGGCGAA TGCAGATCTC CTCGACAATG GCACATTATA TGTCGCCCGC
TTCGAGGAAG ACGGCGGCAG ATGGCTGCCG CTCGTGCACG GACAAAACGG CCTCGACGAG
ACGAATGGCT TCGCCTCCCA GGCGGATGTG CTGATCGAAG CGCGCCGCGC GGCCGATATT
CTCGGGGCAA CCCCGCTCGA CCGCCCTGAA GATGTGACCC CCAGCCCCGC CACCGGCAAA
ATCTATGTCG CGCTCACCAA CTCGAAGGAG CGAGCGCCCG AACAGGTGGA CGCCGTAAAC
CCGCGCGCCG CAAATCTCTG GGGCCAGATC GTCGAGATGG AACCCGAAGG TGGCGATCAC
GGTGCGGAGA ATTTCGCCTG GACGCTCATC GTCAAATGCG GCGATCCGCG CTTCCCCGCC
ATTGGAGCGG CGTGGCATCC CGATACGGGT GAGAACGGCT GGTTCACCTG TCCTGACAAC
ATGGAGGTGG ACGCGAAAGG CCGCCTCTGG GTCGCGACCG ACCAGGGGTC CGGCTGGAGC
GCCTCCTCAG GCGGGGCCGA TGGGCTCTAT GCTCTGGCAA CGCAGGGCGA AAAGCGCGGC
CTCGCGCGGC GCATCTTCCG TGCGCCCATC GGCGCCGAAG TATGTGGCCC CTGCTTCACC
CCCGACGGCA CCACGCTCTT CCTCGCCGTT CAGCATCCAG GCGCCGACGG AACGAAAAGC
TTCAAGGGCT TCGAGCGCAC CTCCACATTC GAGGATCCGG CAACACGCTG GCCCGATTTC
GATGCCGCCA TGCCGCCCCG GCCCTCGGTT CTCGTCATCA CGGCGAAGAA TGGCGGCCCT
GTCGGCGGCT GA
|
|---|
| Protein sequence | MSECDSRGEQ LEAADDEPVA RATAPSLATL WQRRIGRRDL LSGFGKAALL ATVSPAILSL
AACDDTPQYT PDDIFGFEEV PHGIDETHHI AADHNAGILI RWGDPVLPGA PPFNVLEQSA
ASQLAQFGYN NDYIGFIPLP YGSNASDRGL LCIHHEYTND DLMHAGMADA DPREFYTRRI
AEISMAAHGG TIVEVARDGN GNWQVVTESK YNRRITPLST TMSISGPAAG HPRLQTSEDP
TGHNVMGTFN NCAGGITPWG TWLMSEENFN FYFIGQPSDE AEAANHERMG FPAGRAYPWG
AYHKRFDLAA EPREPNRYGW VVEVDPLDPA STPVKRTALG RFKHEGCENA LTKDGRLVVY
MGDDQQFEYL YKFVTAGMVD AGDRAANADL LDNGTLYVAR FEEDGGRWLP LVHGQNGLDE
TNGFASQADV LIEARRAADI LGATPLDRPE DVTPSPATGK IYVALTNSKE RAPEQVDAVN
PRAANLWGQI VEMEPEGGDH GAENFAWTLI VKCGDPRFPA IGAAWHPDTG ENGWFTCPDN
MEVDAKGRLW VATDQGSGWS ASSGGADGLY ALATQGEKRG LARRIFRAPI GAEVCGPCFT
PDGTTLFLAV QHPGADGTKS FKGFERTSTF EDPATRWPDF DAAMPPRPSV LVITAKNGGP
VGG
|
|---|
| |